Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 AC104390.1-201ENST00000555663 520 ntBASIC15.14■□□□□ 0.01
HLA-DRB3P79483 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 Z99916.2-201ENST00000604037 246 ntBASIC15.14■□□□□ 0.01
HLA-DRB3P79483 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 AC092338.2-201ENST00000568827 1415 ntBASIC15.14■□□□□ 0.01
HLA-DRB3P79483 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 AC012317.2-201ENST00000623305 2251 ntBASIC15.14■□□□□ 0.01
HLA-DRB3P79483 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB3P79483 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 MIR4785-201ENST00000585005 73 ntBASIC15.13■□□□□ 0.01
HLA-DRB3P79483 AL024508.2-201ENST00000607749 1894 ntBASIC15.13■□□□□ 0.01
HLA-DRB3P79483 AC116562.4-202ENST00000641738 218 ntBASIC15.13■□□□□ 0.01
HLA-DRB3P79483 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 TNRC18P3-201ENST00000441896 2691 ntBASIC15.13■□□□□ 0.01
HLA-DRB3P79483 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 SIRPAP1-201ENST00000448467 1770 ntBASIC15.13■□□□□ 0.01
HLA-DRB3P79483 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB3P79483 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 AC124067.4-201ENST00000519691 2379 ntBASIC15.12■□□□□ 0.01
HLA-DRB3P79483 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 MIR718-201ENST00000390190 70 ntBASIC15.12■□□□□ 0.01
HLA-DRB3P79483 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 FITM1-202ENST00000559294 800 ntBASIC15.12■□□□□ 0.01
HLA-DRB3P79483 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 AP000525.1-201ENST00000608286 694 ntBASIC15.12■□□□□ 0.01
HLA-DRB3P79483 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DRB3P79483 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB3P79483 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms