Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.32■□□□□ 0.68
MCCD1P59942 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MCCD1P59942 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.32■□□□□ 0.68
MCCD1P59942 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MCCD1P59942 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.32■□□□□ 0.68
MCCD1P59942 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.32■□□□□ 0.68
MCCD1P59942 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.32■□□□□ 0.68
MCCD1P59942 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.32■□□□□ 0.68
MCCD1P59942 AL592071.1-201ENST00000611956 408 ntBASIC19.32■□□□□ 0.68
MCCD1P59942 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MCCD1P59942 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MCCD1P59942 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
MCCD1P59942 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MCCD1P59942 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.31■□□□□ 0.68
MCCD1P59942 AC133963.1-201ENST00000504166 1679 ntBASIC19.31■□□□□ 0.68
MCCD1P59942 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MCCD1P59942 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
MCCD1P59942 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MCCD1P59942 COX5BP2-201ENST00000392354 334 ntBASIC19.31■□□□□ 0.68
MCCD1P59942 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
MCCD1P59942 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.31■□□□□ 0.68
MCCD1P59942 CHCHD2P8-201ENST00000429873 447 ntBASIC19.31■□□□□ 0.68
MCCD1P59942 AP002383.4-201ENST00000442518 975 ntBASIC19.31■□□□□ 0.68
MCCD1P59942 KRT18P35-201ENST00000510488 1269 ntBASIC19.31■□□□□ 0.68
MCCD1P59942 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.31■□□□□ 0.68
MCCD1P59942 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.31■□□□□ 0.68
MCCD1P59942 AC005336.2-201ENST00000593183 939 ntBASIC19.31■□□□□ 0.68
MCCD1P59942 AL121672.3-201ENST00000608644 468 ntBASIC19.31■□□□□ 0.68
MCCD1P59942 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.31■□□□□ 0.68
MCCD1P59942 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
MCCD1P59942 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.31■□□□□ 0.68
MCCD1P59942 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
MCCD1P59942 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.31■□□□□ 0.68
MCCD1P59942 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.3■□□□□ 0.68
MCCD1P59942 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
MCCD1P59942 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.3■□□□□ 0.68
MCCD1P59942 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 DRAXINP1-201ENST00000437611 948 ntBASIC19.3■□□□□ 0.68
MCCD1P59942 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.3■□□□□ 0.68
MCCD1P59942 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.3■□□□□ 0.68
MCCD1P59942 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.3■□□□□ 0.68
MCCD1P59942 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
MCCD1P59942 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.3■□□□□ 0.68
MCCD1P59942 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.3■□□□□ 0.68
MCCD1P59942 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MCCD1P59942 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.3■□□□□ 0.68
MCCD1P59942 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.3■□□□□ 0.68
MCCD1P59942 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.3■□□□□ 0.68
MCCD1P59942 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.3■□□□□ 0.68
MCCD1P59942 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.3■□□□□ 0.68
MCCD1P59942 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
MCCD1P59942 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.3■□□□□ 0.68
MCCD1P59942 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MCCD1P59942 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCCD1P59942 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.29■□□□□ 0.68
MCCD1P59942 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCCD1P59942 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MCCD1P59942 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
MCCD1P59942 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCCD1P59942 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.29■□□□□ 0.68
MCCD1P59942 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCCD1P59942 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCCD1P59942 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MCCD1P59942 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCCD1P59942 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.29■□□□□ 0.68
MCCD1P59942 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.29■□□□□ 0.68
MCCD1P59942 MIR3180-1-201ENST00000580374 94 ntBASIC19.29■□□□□ 0.68
MCCD1P59942 MIR3180-3-201ENST00000584616 94 ntBASIC19.29■□□□□ 0.68
MCCD1P59942 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCCD1P59942 NPAP1P7-201ENST00000613027 823 ntBASIC19.29■□□□□ 0.68
MCCD1P59942 AP000550.4-202ENST00000639755 178 ntBASIC19.29■□□□□ 0.68
MCCD1P59942 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.29■□□□□ 0.68
MCCD1P59942 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCCD1P59942 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MCCD1P59942 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.29■□□□□ 0.68
MCCD1P59942 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MCCD1P59942 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.29■□□□□ 0.68
MCCD1P59942 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCCD1P59942 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCCD1P59942 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCCD1P59942 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms