Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.12■□□□□ 0.65
CACNA2D1P54289 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CACNA2D1P54289 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.12■□□□□ 0.65
CACNA2D1P54289 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA2D1P54289 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CACNA2D1P54289 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.12■□□□□ 0.65
CACNA2D1P54289 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.12■□□□□ 0.65
CACNA2D1P54289 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CACNA2D1P54289 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CACNA2D1P54289 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA2D1P54289 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CACNA2D1P54289 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA2D1P54289 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 AC135776.1-201ENST00000319817 2481 ntBASIC19.11■□□□□ 0.65
CACNA2D1P54289 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 MIR3652-201ENST00000579335 131 ntBASIC19.11■□□□□ 0.65
CACNA2D1P54289 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.11■□□□□ 0.65
CACNA2D1P54289 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA2D1P54289 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CACNA2D1P54289 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.1■□□□□ 0.65
CACNA2D1P54289 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.1■□□□□ 0.65
CACNA2D1P54289 TSPY12P-201ENST00000421279 868 ntBASIC19.1■□□□□ 0.65
CACNA2D1P54289 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.1■□□□□ 0.65
CACNA2D1P54289 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.1■□□□□ 0.65
CACNA2D1P54289 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 AC008687.5-201ENST00000593746 558 ntBASIC19.1■□□□□ 0.65
CACNA2D1P54289 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.1■□□□□ 0.65
CACNA2D1P54289 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CACNA2D1P54289 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.1■□□□□ 0.65
CACNA2D1P54289 AC138932.1-201ENST00000534164 6830 ntBASIC19.1■□□□□ 0.65
CACNA2D1P54289 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CACNA2D1P54289 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA2D1P54289 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA2D1P54289 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA2D1P54289 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA2D1P54289 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA2D1P54289 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA2D1P54289 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 AC068472.1-201ENST00000474589 881 ntBASIC19.09■□□□□ 0.65
CACNA2D1P54289 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 KRT126P-201ENST00000549467 1181 ntBASIC19.09■□□□□ 0.65
CACNA2D1P54289 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA2D1P54289 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA2D1P54289 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA2D1P54289 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms