Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.54■□□□□ 0.72
PDE6CP51160 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6CP51160 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6CP51160 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.53■□□□□ 0.72
PDE6CP51160 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6CP51160 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6CP51160 AC005332.1-201ENST00000577698 1310 ntBASIC19.53■□□□□ 0.72
PDE6CP51160 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6CP51160 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.53■□□□□ 0.72
PDE6CP51160 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6CP51160 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
PDE6CP51160 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6CP51160 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6CP51160 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.53■□□□□ 0.72
PDE6CP51160 SPDYE15P-201ENST00000424157 909 ntBASIC19.53■□□□□ 0.72
PDE6CP51160 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.53■□□□□ 0.72
PDE6CP51160 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.53■□□□□ 0.72
PDE6CP51160 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6CP51160 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6CP51160 AC116407.4-201ENST00000623319 1061 ntBASIC19.53■□□□□ 0.72
PDE6CP51160 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PDE6CP51160 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PDE6CP51160 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PDE6CP51160 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6CP51160 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.53■□□□□ 0.72
PDE6CP51160 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PDE6CP51160 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6CP51160 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6CP51160 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.53■□□□□ 0.72
PDE6CP51160 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6CP51160 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.52■□□□□ 0.72
PDE6CP51160 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6CP51160 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6CP51160 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6CP51160 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6CP51160 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6CP51160 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6CP51160 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6CP51160 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6CP51160 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6CP51160 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.52■□□□□ 0.72
PDE6CP51160 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.52■□□□□ 0.72
PDE6CP51160 AC083849.1-201ENST00000615227 514 ntBASIC19.52■□□□□ 0.72
PDE6CP51160 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.52■□□□□ 0.72
PDE6CP51160 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6CP51160 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDE6CP51160 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PDE6CP51160 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDE6CP51160 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PDE6CP51160 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
PDE6CP51160 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PDE6CP51160 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.51■□□□□ 0.71
PDE6CP51160 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.51■□□□□ 0.71
PDE6CP51160 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.51■□□□□ 0.71
PDE6CP51160 HYMAI.1-201ENST00000620949 238 ntBASIC19.51■□□□□ 0.71
PDE6CP51160 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.51■□□□□ 0.71
PDE6CP51160 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.51■□□□□ 0.71
PDE6CP51160 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.51■□□□□ 0.71
PDE6CP51160 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.51■□□□□ 0.71
PDE6CP51160 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.51■□□□□ 0.71
PDE6CP51160 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 LINC01126-201ENST00000623515 1646 ntBASIC19.51■□□□□ 0.71
PDE6CP51160 FLJ13224-201ENST00000313737 1514 ntBASIC19.51■□□□□ 0.71
PDE6CP51160 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6CP51160 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PDE6CP51160 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PDE6CP51160 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.5■□□□□ 0.71
PDE6CP51160 AL024508.2-201ENST00000607749 1894 ntBASIC19.5■□□□□ 0.71
PDE6CP51160 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE6CP51160 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE6CP51160 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE6CP51160 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms