Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF144AP50876 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF144AP50876 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNF144AP50876 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF144AP50876 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RNF144AP50876 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 SPDYE15P-201ENST00000424157 909 ntBASIC16.81■□□□□ 0.28
RNF144AP50876 AC117947.1-201ENST00000427448 529 ntBASIC16.81■□□□□ 0.28
RNF144AP50876 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF144AP50876 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF144AP50876 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.81■□□□□ 0.28
RNF144AP50876 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF144AP50876 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNF144AP50876 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
RNF144AP50876 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF144AP50876 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF144AP50876 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 KRT8P7-201ENST00000533003 1432 ntBASIC16.8■□□□□ 0.28
RNF144AP50876 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF144AP50876 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RNF144AP50876 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.8■□□□□ 0.28
RNF144AP50876 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF144AP50876 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RNF144AP50876 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF144AP50876 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 COX11P1-201ENST00000489116 835 ntBASIC16.8■□□□□ 0.28
RNF144AP50876 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF144AP50876 AL512604.3-201ENST00000569583 964 ntBASIC16.8■□□□□ 0.28
RNF144AP50876 RN7SL850P-201ENST00000579959 291 ntBASIC16.8■□□□□ 0.28
RNF144AP50876 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 MIR3917-201ENST00000580971 93 ntBASIC16.8■□□□□ 0.28
RNF144AP50876 AC006011.2-201ENST00000621313 1158 ntBASIC16.8■□□□□ 0.28
RNF144AP50876 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF144AP50876 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF144AP50876 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF144AP50876 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF144AP50876 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.8■□□□□ 0.28
RNF144AP50876 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF144AP50876 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RNF144AP50876 AC073508.3-201ENST00000619697 1419 ntBASIC16.79■□□□□ 0.28
RNF144AP50876 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF144AP50876 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RNF144AP50876 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF144AP50876 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RNF144AP50876 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms