Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VEGFBP49765 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.61■□□□□ 0.89
VEGFBP49765 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VEGFBP49765 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VEGFBP49765 AC010460.3-201ENST00000511359 1579 ntBASIC20.61■□□□□ 0.89
VEGFBP49765 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VEGFBP49765 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VEGFBP49765 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VEGFBP49765 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.61■□□□□ 0.89
VEGFBP49765 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.61■□□□□ 0.89
VEGFBP49765 TREML5P-201ENST00000421694 576 ntBASIC20.61■□□□□ 0.89
VEGFBP49765 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.61■□□□□ 0.89
VEGFBP49765 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VEGFBP49765 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.61■□□□□ 0.89
VEGFBP49765 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.61■□□□□ 0.89
VEGFBP49765 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.61■□□□□ 0.89
VEGFBP49765 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VEGFBP49765 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.6■□□□□ 0.89
VEGFBP49765 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VEGFBP49765 AC148477.5-201ENST00000625164 1645 ntBASIC20.6■□□□□ 0.89
VEGFBP49765 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
VEGFBP49765 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VEGFBP49765 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
VEGFBP49765 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
VEGFBP49765 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VEGFBP49765 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VEGFBP49765 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.6■□□□□ 0.89
VEGFBP49765 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.6■□□□□ 0.89
VEGFBP49765 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
VEGFBP49765 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.6■□□□□ 0.89
VEGFBP49765 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.6■□□□□ 0.89
VEGFBP49765 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
VEGFBP49765 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.6■□□□□ 0.89
VEGFBP49765 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VEGFBP49765 TCF3P1-201ENST00000423021 1937 ntBASIC20.6■□□□□ 0.89
VEGFBP49765 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VEGFBP49765 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VEGFBP49765 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VEGFBP49765 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.6■□□□□ 0.89
VEGFBP49765 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VEGFBP49765 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VEGFBP49765 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
VEGFBP49765 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
VEGFBP49765 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
VEGFBP49765 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
VEGFBP49765 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.59■□□□□ 0.89
VEGFBP49765 PTCHD3P3-201ENST00000403073 906 ntBASIC20.59■□□□□ 0.89
VEGFBP49765 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.59■□□□□ 0.89
VEGFBP49765 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.59■□□□□ 0.89
VEGFBP49765 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 AL512638.1-201ENST00000457493 794 ntBASIC20.59■□□□□ 0.89
VEGFBP49765 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 AC125807.1-201ENST00000483097 614 ntBASIC20.59■□□□□ 0.89
VEGFBP49765 IGHV3-42-201ENST00000520410 361 ntBASIC20.59■□□□□ 0.89
VEGFBP49765 IGHV3-71-201ENST00000523324 359 ntBASIC20.59■□□□□ 0.89
VEGFBP49765 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.59■□□□□ 0.89
VEGFBP49765 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.59■□□□□ 0.89
VEGFBP49765 AC026120.1-201ENST00000611536 926 ntBASIC20.59■□□□□ 0.89
VEGFBP49765 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.59■□□□□ 0.89
VEGFBP49765 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.59■□□□□ 0.89
VEGFBP49765 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
VEGFBP49765 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VEGFBP49765 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VEGFBP49765 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
VEGFBP49765 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.58■□□□□ 0.89
VEGFBP49765 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VEGFBP49765 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.58■□□□□ 0.89
VEGFBP49765 U91328.1-201ENST00000437528 223 ntBASIC20.58■□□□□ 0.89
VEGFBP49765 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.58■□□□□ 0.89
VEGFBP49765 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.58■□□□□ 0.89
VEGFBP49765 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.58■□□□□ 0.89
VEGFBP49765 AC112191.1-201ENST00000523689 701 ntBASIC20.58■□□□□ 0.89
VEGFBP49765 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
VEGFBP49765 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.58■□□□□ 0.89
VEGFBP49765 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.58■□□□□ 0.89
VEGFBP49765 GGTLC5P-201ENST00000617623 998 ntBASIC20.58■□□□□ 0.89
VEGFBP49765 AP001059.3-201ENST00000619053 235 ntBASIC20.58■□□□□ 0.89
VEGFBP49765 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
VEGFBP49765 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VEGFBP49765 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VEGFBP49765 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VEGFBP49765 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VEGFBP49765 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.57■□□□□ 0.88
VEGFBP49765 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VEGFBP49765 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VEGFBP49765 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.57■□□□□ 0.88
VEGFBP49765 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
VEGFBP49765 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VEGFBP49765 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms