Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC008764.6-201ENST00000595909 2069 ntBASIC15.99■□□□□ 0.15
MSR1P21757 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MSR1P21757 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MSR1P21757 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.99■□□□□ 0.15
MSR1P21757 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.99■□□□□ 0.15
MSR1P21757 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MSR1P21757 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MSR1P21757 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MSR1P21757 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MSR1P21757 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MSR1P21757 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
MSR1P21757 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MSR1P21757 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MSR1P21757 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.98■□□□□ 0.15
MSR1P21757 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.98■□□□□ 0.15
MSR1P21757 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.98■□□□□ 0.15
MSR1P21757 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
MSR1P21757 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.98■□□□□ 0.15
MSR1P21757 YBX1P2-201ENST00000489612 999 ntBASIC15.98■□□□□ 0.15
MSR1P21757 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.98■□□□□ 0.15
MSR1P21757 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 AC139887.4-201ENST00000607877 719 ntBASIC15.98■□□□□ 0.15
MSR1P21757 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.98■□□□□ 0.15
MSR1P21757 AC073508.3-201ENST00000619697 1419 ntBASIC15.98■□□□□ 0.15
MSR1P21757 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
MSR1P21757 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
MSR1P21757 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.98■□□□□ 0.15
MSR1P21757 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MSR1P21757 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MSR1P21757 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MSR1P21757 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MSR1P21757 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.98■□□□□ 0.15
MSR1P21757 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MSR1P21757 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.97■□□□□ 0.15
MSR1P21757 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.97■□□□□ 0.15
MSR1P21757 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.97■□□□□ 0.15
MSR1P21757 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
MSR1P21757 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MSR1P21757 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 KRT18P57-201ENST00000443599 1254 ntBASIC15.97■□□□□ 0.15
MSR1P21757 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.97■□□□□ 0.15
MSR1P21757 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
MSR1P21757 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 AC011558.1-201ENST00000623459 338 ntBASIC15.97■□□□□ 0.15
MSR1P21757 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MSR1P21757 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MSR1P21757 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.97■□□□□ 0.15
MSR1P21757 AP000997.3-201ENST00000623333 2250 ntBASIC15.97■□□□□ 0.15
MSR1P21757 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
MSR1P21757 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MSR1P21757 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
MSR1P21757 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MSR1P21757 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MSR1P21757 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MSR1P21757 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MSR1P21757 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MSR1P21757 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
MSR1P21757 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
MSR1P21757 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.96■□□□□ 0.15
MSR1P21757 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.96■□□□□ 0.15
MSR1P21757 AL133373.2-201ENST00000623187 2828 ntBASIC15.96■□□□□ 0.15
MSR1P21757 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.96■□□□□ 0.15
MSR1P21757 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.96■□□□□ 0.15
MSR1P21757 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.96■□□□□ 0.15
MSR1P21757 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.96■□□□□ 0.15
MSR1P21757 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms