Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AL645939.2-201ENST00000427340 991 ntBASIC21.97■■□□□ 1.11
COL11A2P13942 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.97■■□□□ 1.11
COL11A2P13942 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.97■■□□□ 1.11
COL11A2P13942 SNHG9-202ENST00000564014 471 ntBASIC21.97■■□□□ 1.11
COL11A2P13942 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.97■■□□□ 1.11
COL11A2P13942 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.97■■□□□ 1.11
COL11A2P13942 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A2P13942 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
COL11A2P13942 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A2P13942 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.97■■□□□ 1.11
COL11A2P13942 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A2P13942 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A2P13942 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A2P13942 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A2P13942 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A2P13942 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.96■■□□□ 1.11
COL11A2P13942 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
COL11A2P13942 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
COL11A2P13942 FAM8A3P-201ENST00000427218 844 ntBASIC21.96■■□□□ 1.11
COL11A2P13942 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.96■■□□□ 1.11
COL11A2P13942 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.96■■□□□ 1.11
COL11A2P13942 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
COL11A2P13942 AL031432.2-201ENST00000566714 459 ntBASIC21.96■■□□□ 1.11
COL11A2P13942 AL928711.1-201ENST00000570165 459 ntBASIC21.96■■□□□ 1.11
COL11A2P13942 AP002472.1-201ENST00000577490 586 ntBASIC21.96■■□□□ 1.11
COL11A2P13942 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.96■■□□□ 1.11
COL11A2P13942 AC011467.4-201ENST00000594891 528 ntBASIC21.96■■□□□ 1.11
COL11A2P13942 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
COL11A2P13942 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A2P13942 AC132938.5-201ENST00000624980 1813 ntBASIC21.96■■□□□ 1.11
COL11A2P13942 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A2P13942 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.96■■□□□ 1.11
COL11A2P13942 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
COL11A2P13942 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.95■■□□□ 1.11
COL11A2P13942 SIRPAP1-201ENST00000448467 1770 ntBASIC21.95■■□□□ 1.1
COL11A2P13942 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.95■■□□□ 1.1
COL11A2P13942 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
COL11A2P13942 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.95■■□□□ 1.1
COL11A2P13942 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.95■■□□□ 1.1
COL11A2P13942 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.95■■□□□ 1.1
COL11A2P13942 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
COL11A2P13942 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL11A2P13942 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL11A2P13942 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL11A2P13942 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.95■■□□□ 1.1
COL11A2P13942 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL11A2P13942 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL11A2P13942 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL11A2P13942 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.95■■□□□ 1.1
COL11A2P13942 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL11A2P13942 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
COL11A2P13942 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.94■■□□□ 1.1
COL11A2P13942 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.94■■□□□ 1.1
COL11A2P13942 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A2P13942 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.94■■□□□ 1.1
COL11A2P13942 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A2P13942 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A2P13942 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A2P13942 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.94■■□□□ 1.1
COL11A2P13942 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A2P13942 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A2P13942 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A2P13942 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.94■■□□□ 1.1
COL11A2P13942 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.94■■□□□ 1.1
COL11A2P13942 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A2P13942 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A2P13942 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.93■■□□□ 1.1
COL11A2P13942 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A2P13942 AL139400.1-201ENST00000366220 510 ntBASIC21.93■■□□□ 1.1
COL11A2P13942 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A2P13942 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.93■■□□□ 1.1
COL11A2P13942 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.93■■□□□ 1.1
COL11A2P13942 GMCL1P1-201ENST00000463439 1581 ntBASIC21.93■■□□□ 1.1
COL11A2P13942 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
COL11A2P13942 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A2P13942 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A2P13942 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A2P13942 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.93■■□□□ 1.1
COL11A2P13942 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.93■■□□□ 1.1
COL11A2P13942 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.93■■□□□ 1.1
COL11A2P13942 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.93■■□□□ 1.1
COL11A2P13942 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A2P13942 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.92■■□□□ 1.1
COL11A2P13942 IGHV3-65-201ENST00000523210 341 ntBASIC21.92■■□□□ 1.1
COL11A2P13942 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.92■■□□□ 1.1
COL11A2P13942 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.92■■□□□ 1.1
COL11A2P13942 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A2P13942 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
COL11A2P13942 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A2P13942 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A2P13942 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
COL11A2P13942 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.92■■□□□ 1.1
COL11A2P13942 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A2P13942 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.92■■□□□ 1.1
COL11A2P13942 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.92■■□□□ 1.1
COL11A2P13942 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A2P13942 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.92■■□□□ 1.1
COL11A2P13942 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.92■■□□□ 1.1
COL11A2P13942 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.92■■□□□ 1.1
COL11A2P13942 KRT19P2-202ENST00000557173 1012 ntBASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms