Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.82■□□□□ 0.76
ITGA4P13612 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ITGA4P13612 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ITGA4P13612 SDHAP2-201ENST00000455183 2001 ntBASIC19.82■□□□□ 0.76
ITGA4P13612 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA4P13612 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.82■□□□□ 0.76
ITGA4P13612 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ITGA4P13612 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.82■□□□□ 0.76
ITGA4P13612 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.82■□□□□ 0.76
ITGA4P13612 UNC93B7-201ENST00000509439 705 ntBASIC19.82■□□□□ 0.76
ITGA4P13612 FOSL1P1-201ENST00000511041 816 ntBASIC19.82■□□□□ 0.76
ITGA4P13612 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA4P13612 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA4P13612 RN7SL510P-201ENST00000581311 263 ntBASIC19.82■□□□□ 0.76
ITGA4P13612 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.82■□□□□ 0.76
ITGA4P13612 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
ITGA4P13612 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.82■□□□□ 0.76
ITGA4P13612 AL121772.3-201ENST00000610840 674 ntBASIC19.82■□□□□ 0.76
ITGA4P13612 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.82■□□□□ 0.76
ITGA4P13612 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.82■□□□□ 0.76
ITGA4P13612 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA4P13612 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA4P13612 LINC00167-201ENST00000530583 1419 ntBASIC19.82■□□□□ 0.76
ITGA4P13612 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA4P13612 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA4P13612 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA4P13612 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA4P13612 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA4P13612 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA4P13612 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA4P13612 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ITGA4P13612 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.81■□□□□ 0.76
ITGA4P13612 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ITGA4P13612 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ITGA4P13612 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
ITGA4P13612 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 AC126763.1-201ENST00000552015 2118 ntBASIC19.81■□□□□ 0.76
ITGA4P13612 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGA4P13612 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ITGA4P13612 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGA4P13612 TSPY19P-201ENST00000418461 509 ntBASIC19.81■□□□□ 0.76
ITGA4P13612 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ITGA4P13612 TSPY18P-201ENST00000441642 509 ntBASIC19.81■□□□□ 0.76
ITGA4P13612 VENTXP7-201ENST00000475503 772 ntBASIC19.81■□□□□ 0.76
ITGA4P13612 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGA4P13612 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.81■□□□□ 0.76
ITGA4P13612 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.81■□□□□ 0.76
ITGA4P13612 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.81■□□□□ 0.76
ITGA4P13612 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.81■□□□□ 0.76
ITGA4P13612 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ITGA4P13612 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGA4P13612 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ITGA4P13612 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
ITGA4P13612 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA4P13612 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ITGA4P13612 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.8■□□□□ 0.76
ITGA4P13612 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.8■□□□□ 0.76
ITGA4P13612 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.8■□□□□ 0.76
ITGA4P13612 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 KRT17P6-201ENST00000453795 1220 ntBASIC19.8■□□□□ 0.76
ITGA4P13612 AC091304.2-201ENST00000564639 760 ntBASIC19.8■□□□□ 0.76
ITGA4P13612 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ITGA4P13612 AL732292.2-201ENST00000609649 430 ntBASIC19.8■□□□□ 0.76
ITGA4P13612 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.8■□□□□ 0.76
ITGA4P13612 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA4P13612 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.8■□□□□ 0.76
ITGA4P13612 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.8■□□□□ 0.76
ITGA4P13612 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms