Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
DEFA4P12838 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.72□□□□□ -0.05
DEFA4P12838 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
DEFA4P12838 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.72□□□□□ -0.05
DEFA4P12838 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.72□□□□□ -0.05
DEFA4P12838 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.72□□□□□ -0.05
DEFA4P12838 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
DEFA4P12838 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
DEFA4P12838 MCCD1P1-208ENST00000445732 328 ntBASIC14.72□□□□□ -0.05
DEFA4P12838 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.72□□□□□ -0.05
DEFA4P12838 REXO1L10P-201ENST00000615707 1290 ntBASIC14.72□□□□□ -0.05
DEFA4P12838 REXO1L12P-201ENST00000622156 912 ntBASIC14.72□□□□□ -0.05
DEFA4P12838 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.72□□□□□ -0.05
DEFA4P12838 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
DEFA4P12838 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
DEFA4P12838 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
DEFA4P12838 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
DEFA4P12838 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.72□□□□□ -0.05
DEFA4P12838 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
DEFA4P12838 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.72□□□□□ -0.05
DEFA4P12838 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA4P12838 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
DEFA4P12838 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
DEFA4P12838 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
DEFA4P12838 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
DEFA4P12838 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA4P12838 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
DEFA4P12838 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA4P12838 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA4P12838 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
DEFA4P12838 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA4P12838 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.71□□□□□ -0.05
DEFA4P12838 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA4P12838 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA4P12838 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
DEFA4P12838 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA4P12838 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA4P12838 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA4P12838 UNC93B2-201ENST00000285383 730 ntBASIC14.71□□□□□ -0.05
DEFA4P12838 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA4P12838 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA4P12838 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
DEFA4P12838 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA4P12838 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA4P12838 AC008550.1-201ENST00000511500 884 ntBASIC14.71□□□□□ -0.05
DEFA4P12838 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA4P12838 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA4P12838 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA4P12838 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.71□□□□□ -0.05
DEFA4P12838 AP003071.4-201ENST00000562276 1284 ntBASIC14.71□□□□□ -0.05
DEFA4P12838 MIR4785-201ENST00000585005 73 ntBASIC14.71□□□□□ -0.05
DEFA4P12838 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA4P12838 Z99916.2-201ENST00000604037 246 ntBASIC14.71□□□□□ -0.05
DEFA4P12838 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
DEFA4P12838 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA4P12838 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA4P12838 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA4P12838 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA4P12838 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
DEFA4P12838 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEFA4P12838 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
DEFA4P12838 AL109659.2-201ENST00000606809 1674 ntBASIC14.71□□□□□ -0.06
DEFA4P12838 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.71□□□□□ -0.06
DEFA4P12838 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEFA4P12838 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEFA4P12838 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
DEFA4P12838 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA4P12838 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA4P12838 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
DEFA4P12838 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.7□□□□□ -0.06
DEFA4P12838 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA4P12838 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
DEFA4P12838 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.7□□□□□ -0.06
DEFA4P12838 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.7□□□□□ -0.06
DEFA4P12838 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.7□□□□□ -0.06
DEFA4P12838 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms