Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 AC067852.2-201ENST00000590513 2313 ntBASIC19.55■□□□□ 0.72
CCDC172P0C7W6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.55■□□□□ 0.72
CCDC172P0C7W6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC172P0C7W6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 AC099343.3-201ENST00000605834 2503 ntBASIC19.54■□□□□ 0.72
CCDC172P0C7W6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 MMP23A-201ENST00000234610 1017 ntBASIC19.54■□□□□ 0.72
CCDC172P0C7W6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 AC141586.5-201ENST00000624546 2050 ntBASIC19.54■□□□□ 0.72
CCDC172P0C7W6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 LINC01126-201ENST00000623515 1646 ntBASIC19.54■□□□□ 0.72
CCDC172P0C7W6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC172P0C7W6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 MST1L-201ENST00000442552 2185 ntBASIC19.53■□□□□ 0.72
CCDC172P0C7W6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 AP000523.1-201ENST00000398242 1049 ntBASIC19.53■□□□□ 0.72
CCDC172P0C7W6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms