Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.39■□□□□ 0.21
FREM3P0C091 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.39■□□□□ 0.21
FREM3P0C091 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.39■□□□□ 0.21
FREM3P0C091 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.39■□□□□ 0.21
FREM3P0C091 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.39■□□□□ 0.21
FREM3P0C091 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.39■□□□□ 0.21
FREM3P0C091 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.39■□□□□ 0.21
FREM3P0C091 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.39■□□□□ 0.21
FREM3P0C091 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
FREM3P0C091 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.39■□□□□ 0.21
FREM3P0C091 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
FREM3P0C091 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.39■□□□□ 0.21
FREM3P0C091 AP000867.3-201ENST00000524675 377 ntBASIC16.39■□□□□ 0.21
FREM3P0C091 Z69720.1-201ENST00000601483 472 ntBASIC16.39■□□□□ 0.21
FREM3P0C091 AC138894.3-201ENST00000603787 634 ntBASIC16.39■□□□□ 0.21
FREM3P0C091 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.39■□□□□ 0.21
FREM3P0C091 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.39■□□□□ 0.21
FREM3P0C091 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FREM3P0C091 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.38■□□□□ 0.21
FREM3P0C091 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
FREM3P0C091 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FREM3P0C091 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FREM3P0C091 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FREM3P0C091 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
FREM3P0C091 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FREM3P0C091 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
FREM3P0C091 TPM4P1-201ENST00000436100 807 ntBASIC16.38■□□□□ 0.21
FREM3P0C091 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.38■□□□□ 0.21
FREM3P0C091 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.38■□□□□ 0.21
FREM3P0C091 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FREM3P0C091 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.38■□□□□ 0.21
FREM3P0C091 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
FREM3P0C091 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
FREM3P0C091 AC011498.5-201ENST00000592027 486 ntBASIC16.38■□□□□ 0.21
FREM3P0C091 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.38■□□□□ 0.21
FREM3P0C091 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FREM3P0C091 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.38■□□□□ 0.21
FREM3P0C091 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FREM3P0C091 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FREM3P0C091 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FREM3P0C091 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.38■□□□□ 0.21
FREM3P0C091 AC068880.1-201ENST00000507289 2297 ntBASIC16.38■□□□□ 0.21
FREM3P0C091 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
FREM3P0C091 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.37■□□□□ 0.21
FREM3P0C091 KRT17P6-201ENST00000453795 1220 ntBASIC16.37■□□□□ 0.21
FREM3P0C091 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.37■□□□□ 0.21
FREM3P0C091 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.37■□□□□ 0.21
FREM3P0C091 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 AC099336.1-202ENST00000602961 463 ntBASIC16.37■□□□□ 0.21
FREM3P0C091 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
FREM3P0C091 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.37■□□□□ 0.21
FREM3P0C091 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 NSUN5P1-202ENST00000421140 1535 ntBASIC16.37■□□□□ 0.21
FREM3P0C091 NSUN5P2-203ENST00000457352 1529 ntBASIC16.37■□□□□ 0.21
FREM3P0C091 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 AC093010.1-201ENST00000473625 1624 ntBASIC16.37■□□□□ 0.21
FREM3P0C091 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
FREM3P0C091 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.37■□□□□ 0.21
FREM3P0C091 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.37■□□□□ 0.21
FREM3P0C091 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.37■□□□□ 0.21
FREM3P0C091 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
FREM3P0C091 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.37■□□□□ 0.21
FREM3P0C091 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.37■□□□□ 0.21
FREM3P0C091 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
FREM3P0C091 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
FREM3P0C091 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.37■□□□□ 0.21
FREM3P0C091 AC011840.4-201ENST00000578471 627 ntBASIC16.37■□□□□ 0.21
FREM3P0C091 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms