Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.03□□□□□ -0.16
CXCL1P09341 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL1P09341 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.03□□□□□ -0.16
CXCL1P09341 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CXCL1P09341 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL1P09341 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CXCL1P09341 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.03□□□□□ -0.16
CXCL1P09341 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.03□□□□□ -0.16
CXCL1P09341 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 AP006587.1-201ENST00000534129 1502 ntBASIC14.03□□□□□ -0.16
CXCL1P09341 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CXCL1P09341 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CXCL1P09341 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CXCL1P09341 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
CXCL1P09341 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL1P09341 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CXCL1P09341 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL1P09341 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL1P09341 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.16
CXCL1P09341 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL1P09341 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.02□□□□□ -0.16
CXCL1P09341 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL1P09341 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL1P09341 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL1P09341 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL1P09341 AC008556.1-201ENST00000610908 2040 ntBASIC14.02□□□□□ -0.16
CXCL1P09341 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL1P09341 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CXCL1P09341 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL1P09341 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CXCL1P09341 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL1P09341 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL1P09341 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL1P09341 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CXCL1P09341 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.17
CXCL1P09341 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
CXCL1P09341 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CXCL1P09341 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.02□□□□□ -0.17
CXCL1P09341 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CXCL1P09341 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CXCL1P09341 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
CXCL1P09341 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CXCL1P09341 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.02□□□□□ -0.17
CXCL1P09341 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL1P09341 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCL1P09341 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCL1P09341 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CXCL1P09341 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CXCL1P09341 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCL1P09341 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CXCL1P09341 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.01□□□□□ -0.17
CXCL1P09341 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.01□□□□□ -0.17
CXCL1P09341 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL1P09341 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.01□□□□□ -0.17
CXCL1P09341 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms