Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC091390.4-202ENST00000476426 537 ntBASIC20.29■□□□□ 0.84
TPM3P06753 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.29■□□□□ 0.84
TPM3P06753 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.29■□□□□ 0.84
TPM3P06753 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TPM3P06753 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TPM3P06753 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.29■□□□□ 0.84
TPM3P06753 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.29■□□□□ 0.84
TPM3P06753 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TPM3P06753 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.28■□□□□ 0.84
TPM3P06753 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.28■□□□□ 0.84
TPM3P06753 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.28■□□□□ 0.84
TPM3P06753 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TPM3P06753 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TPM3P06753 CKBP1-201ENST00000565489 1086 ntBASIC20.28■□□□□ 0.84
TPM3P06753 AC142086.2-201ENST00000569753 217 ntBASIC20.28■□□□□ 0.84
TPM3P06753 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TPM3P06753 AL023875.1-201ENST00000640777 796 ntBASIC20.28■□□□□ 0.84
TPM3P06753 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPM3P06753 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TPM3P06753 KRT18P55-202ENST00000578578 1546 ntBASIC20.27■□□□□ 0.84
TPM3P06753 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.27■□□□□ 0.84
TPM3P06753 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.27■□□□□ 0.84
TPM3P06753 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TPM3P06753 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TPM3P06753 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TPM3P06753 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TPM3P06753 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
TPM3P06753 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.27■□□□□ 0.84
TPM3P06753 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TPM3P06753 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TPM3P06753 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TPM3P06753 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.27■□□□□ 0.84
TPM3P06753 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TPM3P06753 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.27■□□□□ 0.84
TPM3P06753 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TPM3P06753 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TPM3P06753 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TPM3P06753 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TPM3P06753 AP002982.1-201ENST00000492365 877 ntBASIC20.27■□□□□ 0.84
TPM3P06753 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TPM3P06753 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.27■□□□□ 0.84
TPM3P06753 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TPM3P06753 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.27■□□□□ 0.84
TPM3P06753 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
TPM3P06753 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TPM3P06753 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TPM3P06753 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
TPM3P06753 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TPM3P06753 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TPM3P06753 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
TPM3P06753 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
TPM3P06753 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
TPM3P06753 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
TPM3P06753 AL139384.1-201ENST00000612143 3047 ntBASIC20.27■□□□□ 0.83
TPM3P06753 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.26■□□□□ 0.83
TPM3P06753 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TPM3P06753 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.26■□□□□ 0.83
TPM3P06753 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TPM3P06753 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TPM3P06753 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.26■□□□□ 0.83
TPM3P06753 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.26■□□□□ 0.83
TPM3P06753 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TPM3P06753 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.26■□□□□ 0.83
TPM3P06753 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.26■□□□□ 0.83
TPM3P06753 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TPM3P06753 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms