Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.64■■□□□ 1.38
COL5A2P05997 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.64■■□□□ 1.38
COL5A2P05997 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
COL5A2P05997 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL5A2P05997 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL5A2P05997 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC23.64■■□□□ 1.37
COL5A2P05997 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
COL5A2P05997 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
COL5A2P05997 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL5A2P05997 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
COL5A2P05997 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
COL5A2P05997 AC132938.5-201ENST00000624980 1813 ntBASIC23.64■■□□□ 1.37
COL5A2P05997 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL5A2P05997 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL5A2P05997 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.63■■□□□ 1.37
COL5A2P05997 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL5A2P05997 PRSS29P-201ENST00000440800 595 ntBASIC23.63■■□□□ 1.37
COL5A2P05997 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC23.63■■□□□ 1.37
COL5A2P05997 AL031432.2-201ENST00000566714 459 ntBASIC23.63■■□□□ 1.37
COL5A2P05997 AL928711.1-201ENST00000570165 459 ntBASIC23.63■■□□□ 1.37
COL5A2P05997 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC23.63■■□□□ 1.37
COL5A2P05997 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC23.63■■□□□ 1.37
COL5A2P05997 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL5A2P05997 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
COL5A2P05997 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL5A2P05997 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.63■■□□□ 1.37
COL5A2P05997 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.63■■□□□ 1.37
COL5A2P05997 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.63■■□□□ 1.37
COL5A2P05997 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL5A2P05997 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL5A2P05997 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL5A2P05997 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC23.62■■□□□ 1.37
COL5A2P05997 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL5A2P05997 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
COL5A2P05997 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC23.62■■□□□ 1.37
COL5A2P05997 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC23.62■■□□□ 1.37
COL5A2P05997 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC23.62■■□□□ 1.37
COL5A2P05997 AC010654.1-201ENST00000615722 808 ntBASIC23.62■■□□□ 1.37
COL5A2P05997 AL805961.1-202ENST00000641562 540 ntBASIC23.62■■□□□ 1.37
COL5A2P05997 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL5A2P05997 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
COL5A2P05997 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.62■■□□□ 1.37
COL5A2P05997 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL5A2P05997 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL5A2P05997 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL5A2P05997 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
COL5A2P05997 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL5A2P05997 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL5A2P05997 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC23.62■■□□□ 1.37
COL5A2P05997 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
COL5A2P05997 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
COL5A2P05997 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC23.62■■□□□ 1.37
COL5A2P05997 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC23.62■■□□□ 1.37
COL5A2P05997 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC23.62■■□□□ 1.37
COL5A2P05997 RPL28-205ENST00000558131 444 ntTSL 5 BASIC23.62■■□□□ 1.37
COL5A2P05997 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC23.62■■□□□ 1.37
COL5A2P05997 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
COL5A2P05997 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC23.62■■□□□ 1.37
COL5A2P05997 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.61■■□□□ 1.37
COL5A2P05997 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL5A2P05997 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL5A2P05997 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL5A2P05997 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL5A2P05997 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC23.61■■□□□ 1.37
COL5A2P05997 AFG3L1P-217ENST00000557444 2447 ntBASIC23.61■■□□□ 1.37
COL5A2P05997 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL5A2P05997 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.61■■□□□ 1.37
COL5A2P05997 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL5A2P05997 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL5A2P05997 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL5A2P05997 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC23.61■■□□□ 1.37
COL5A2P05997 AC103564.2-201ENST00000432853 1299 ntBASIC23.61■■□□□ 1.37
COL5A2P05997 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL5A2P05997 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC23.61■■□□□ 1.37
COL5A2P05997 AC093028.1-201ENST00000622998 982 ntBASIC23.61■■□□□ 1.37
COL5A2P05997 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL5A2P05997 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
COL5A2P05997 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL5A2P05997 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL5A2P05997 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL5A2P05997 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL5A2P05997 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL5A2P05997 MIR770-201ENST00000390219 98 ntBASIC23.6■■□□□ 1.37
COL5A2P05997 KLF4P1-201ENST00000412782 1185 ntBASIC23.6■■□□□ 1.37
COL5A2P05997 CEND1P1-201ENST00000451006 455 ntBASIC23.6■■□□□ 1.37
COL5A2P05997 PON3-205ENST00000451904 1053 ntTSL 3 BASIC23.6■■□□□ 1.37
COL5A2P05997 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL5A2P05997 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
COL5A2P05997 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL5A2P05997 AC004790.2-201ENST00000623588 572 ntBASIC23.6■■□□□ 1.37
COL5A2P05997 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC23.6■■□□□ 1.37
COL5A2P05997 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL5A2P05997 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
COL5A2P05997 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC23.6■■□□□ 1.37
COL5A2P05997 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL5A2P05997 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL5A2P05997 GMCL1P1-201ENST00000463439 1581 ntBASIC23.6■■□□□ 1.37
COL5A2P05997 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL5A2P05997 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.6■■□□□ 1.37
COL5A2P05997 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms