Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHGBP05060 GUSBP12-201ENST00000513727 720 ntBASIC21.69■■□□□ 1.06
CHGBP05060 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.69■■□□□ 1.06
CHGBP05060 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHGBP05060 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.69■■□□□ 1.06
CHGBP05060 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.69■■□□□ 1.06
CHGBP05060 AC009154.2-201ENST00000621177 724 ntBASIC21.69■■□□□ 1.06
CHGBP05060 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHGBP05060 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHGBP05060 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
CHGBP05060 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CHGBP05060 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CHGBP05060 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHGBP05060 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
CHGBP05060 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHGBP05060 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CHGBP05060 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.68■■□□□ 1.06
CHGBP05060 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.68■■□□□ 1.06
CHGBP05060 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CHGBP05060 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CHGBP05060 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CHGBP05060 IGHV3-47-201ENST00000425060 335 ntBASIC21.68■■□□□ 1.06
CHGBP05060 KRT18P65-201ENST00000439811 1286 ntBASIC21.68■■□□□ 1.06
CHGBP05060 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.68■■□□□ 1.06
CHGBP05060 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.68■■□□□ 1.06
CHGBP05060 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.68■■□□□ 1.06
CHGBP05060 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.68■■□□□ 1.06
CHGBP05060 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.68■■□□□ 1.06
CHGBP05060 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.68■■□□□ 1.06
CHGBP05060 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHGBP05060 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.68■■□□□ 1.06
CHGBP05060 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.68■■□□□ 1.06
CHGBP05060 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.68■■□□□ 1.06
CHGBP05060 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHGBP05060 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.68■■□□□ 1.06
CHGBP05060 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHGBP05060 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CHGBP05060 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHGBP05060 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.68■■□□□ 1.06
CHGBP05060 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CHGBP05060 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHGBP05060 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.68■■□□□ 1.06
CHGBP05060 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHGBP05060 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHGBP05060 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHGBP05060 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHGBP05060 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHGBP05060 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
CHGBP05060 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHGBP05060 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
CHGBP05060 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.67■■□□□ 1.06
CHGBP05060 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.67■■□□□ 1.06
CHGBP05060 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.67■■□□□ 1.06
CHGBP05060 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CHGBP05060 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CHGBP05060 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.67■■□□□ 1.06
CHGBP05060 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.67■■□□□ 1.06
CHGBP05060 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
CHGBP05060 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.67■■□□□ 1.06
CHGBP05060 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.67■■□□□ 1.06
CHGBP05060 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHGBP05060 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.66■■□□□ 1.06
CHGBP05060 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHGBP05060 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHGBP05060 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.66■■□□□ 1.06
CHGBP05060 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CHGBP05060 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHGBP05060 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CHGBP05060 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
CHGBP05060 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CHGBP05060 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHGBP05060 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHGBP05060 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.66■■□□□ 1.06
CHGBP05060 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.66■■□□□ 1.06
CHGBP05060 AC112698.1-201ENST00000510299 916 ntBASIC21.66■■□□□ 1.06
CHGBP05060 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.66■■□□□ 1.06
CHGBP05060 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.66■■□□□ 1.06
CHGBP05060 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHGBP05060 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHGBP05060 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.66■■□□□ 1.06
CHGBP05060 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHGBP05060 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CHGBP05060 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms