Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN1O95832 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN1O95832 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN1O95832 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 RCN1P2-201ENST00000398357 915 ntBASIC16.12■□□□□ 0.17
CLDN1O95832 RBM17P3-201ENST00000417687 1192 ntBASIC16.12■□□□□ 0.17
CLDN1O95832 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN1O95832 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN1O95832 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN1O95832 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN1O95832 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN1O95832 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN1O95832 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN1O95832 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLDN1O95832 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN1O95832 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
CLDN1O95832 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CLDN1O95832 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN1O95832 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
CLDN1O95832 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLDN1O95832 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN1O95832 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CLDN1O95832 AC092910.1-201ENST00000482027 1129 ntBASIC16.11■□□□□ 0.17
CLDN1O95832 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN1O95832 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN1O95832 Z83851.2-201ENST00000609564 659 ntBASIC16.11■□□□□ 0.17
CLDN1O95832 AP001269.4-201ENST00000609611 512 ntBASIC16.11■□□□□ 0.17
CLDN1O95832 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN1O95832 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN1O95832 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN1O95832 KRT18P28-201ENST00000453838 1332 ntBASIC16.11■□□□□ 0.17
CLDN1O95832 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN1O95832 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN1O95832 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN1O95832 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CLDN1O95832 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN1O95832 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CLDN1O95832 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN1O95832 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN1O95832 HTR5BP-201ENST00000430851 1154 ntBASIC16.1■□□□□ 0.17
CLDN1O95832 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CLDN1O95832 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN1O95832 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN1O95832 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN1O95832 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN1O95832 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN1O95832 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN1O95832 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CLDN1O95832 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN1O95832 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms