Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
RTN3O95197 ESPNP-201ENST00000270691 2015 ntBASIC19.01■□□□□ 0.63
RTN3O95197 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RTN3O95197 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTN3O95197 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTN3O95197 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
RTN3O95197 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTN3O95197 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTN3O95197 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTN3O95197 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.01■□□□□ 0.63
RTN3O95197 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTN3O95197 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTN3O95197 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19■□□□□ 0.63
RTN3O95197 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RTN3O95197 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RTN3O95197 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
RTN3O95197 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
RTN3O95197 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 KRT18P65-201ENST00000439811 1286 ntBASIC19■□□□□ 0.63
RTN3O95197 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19■□□□□ 0.63
RTN3O95197 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19■□□□□ 0.63
RTN3O95197 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19■□□□□ 0.63
RTN3O95197 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19■□□□□ 0.63
RTN3O95197 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19■□□□□ 0.63
RTN3O95197 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19■□□□□ 0.63
RTN3O95197 ABR-217ENST00000572441 563 ntTSL 4 BASIC19■□□□□ 0.63
RTN3O95197 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19■□□□□ 0.63
RTN3O95197 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19■□□□□ 0.63
RTN3O95197 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RTN3O95197 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RTN3O95197 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
RTN3O95197 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN3O95197 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN3O95197 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN3O95197 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RTN3O95197 AL139384.1-201ENST00000612143 3047 ntBASIC18.99■□□□□ 0.63
RTN3O95197 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN3O95197 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.99■□□□□ 0.63
RTN3O95197 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.99■□□□□ 0.63
RTN3O95197 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.99■□□□□ 0.63
RTN3O95197 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
RTN3O95197 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN3O95197 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN3O95197 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.99■□□□□ 0.63
RTN3O95197 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.99■□□□□ 0.63
RTN3O95197 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RTN3O95197 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.99■□□□□ 0.63
RTN3O95197 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RTN3O95197 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RTN3O95197 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RTN3O95197 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.99■□□□□ 0.63
RTN3O95197 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN3O95197 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN3O95197 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN3O95197 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN3O95197 LINC00167-201ENST00000530583 1419 ntBASIC18.99■□□□□ 0.63
RTN3O95197 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN3O95197 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN3O95197 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.99■□□□□ 0.63
RTN3O95197 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
RTN3O95197 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
RTN3O95197 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 AC011270.2-201ENST00000624293 2550 ntBASIC18.98■□□□□ 0.63
RTN3O95197 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.98■□□□□ 0.63
RTN3O95197 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RTN3O95197 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.98■□□□□ 0.63
RTN3O95197 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RTN3O95197 AL845331.1-201ENST00000424978 1190 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms