Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GPC4O75487 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
GPC4O75487 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GPC4O75487 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GPC4O75487 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GPC4O75487 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.14■□□□□ 0.49
GPC4O75487 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
GPC4O75487 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GPC4O75487 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.13■□□□□ 0.49
GPC4O75487 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.13■□□□□ 0.49
GPC4O75487 AL163051.1-201ENST00000569214 1512 ntBASIC18.13■□□□□ 0.49
GPC4O75487 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
GPC4O75487 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
GPC4O75487 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.13■□□□□ 0.49
GPC4O75487 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
GPC4O75487 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.13■□□□□ 0.49
GPC4O75487 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.13■□□□□ 0.49
GPC4O75487 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
GPC4O75487 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.13■□□□□ 0.49
GPC4O75487 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.13■□□□□ 0.49
GPC4O75487 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.13■□□□□ 0.49
GPC4O75487 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 AC024243.1-201ENST00000609234 778 ntBASIC18.13■□□□□ 0.49
GPC4O75487 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.13■□□□□ 0.49
GPC4O75487 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
GPC4O75487 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
GPC4O75487 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GPC4O75487 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.13■□□□□ 0.49
GPC4O75487 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.12■□□□□ 0.49
GPC4O75487 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
GPC4O75487 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
GPC4O75487 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
GPC4O75487 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.12■□□□□ 0.49
GPC4O75487 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.12■□□□□ 0.49
GPC4O75487 COX11P1-201ENST00000489116 835 ntBASIC18.12■□□□□ 0.49
GPC4O75487 AC092865.7-201ENST00000641832 219 ntBASIC18.12■□□□□ 0.49
GPC4O75487 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.12■□□□□ 0.49
GPC4O75487 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.12■□□□□ 0.49
GPC4O75487 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.12■□□□□ 0.49
GPC4O75487 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.12■□□□□ 0.49
GPC4O75487 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.12■□□□□ 0.49
GPC4O75487 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC4O75487 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.12■□□□□ 0.49
GPC4O75487 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
GPC4O75487 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 RCN1P1-201ENST00000400413 996 ntBASIC18.11■□□□□ 0.49
GPC4O75487 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.11■□□□□ 0.49
GPC4O75487 KRT18P57-201ENST00000443599 1254 ntBASIC18.11■□□□□ 0.49
GPC4O75487 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.11■□□□□ 0.49
GPC4O75487 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.11■□□□□ 0.49
GPC4O75487 AC010240.3-201ENST00000607688 395 ntBASIC18.11■□□□□ 0.49
GPC4O75487 AL031432.5-201ENST00000641059 760 ntBASIC18.11■□□□□ 0.49
GPC4O75487 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
GPC4O75487 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.11■□□□□ 0.49
GPC4O75487 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms