Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EDF1O60869 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EDF1O60869 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
EDF1O60869 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EDF1O60869 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
EDF1O60869 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.79■□□□□ 0.44
EDF1O60869 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EDF1O60869 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
EDF1O60869 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.79■□□□□ 0.44
EDF1O60869 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.79■□□□□ 0.44
EDF1O60869 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.79■□□□□ 0.44
EDF1O60869 DUTP2-201ENST00000519164 463 ntBASIC17.79■□□□□ 0.44
EDF1O60869 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.79■□□□□ 0.44
EDF1O60869 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EDF1O60869 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.79■□□□□ 0.44
EDF1O60869 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.79■□□□□ 0.44
EDF1O60869 AC011298.2-201ENST00000617989 482 ntBASIC17.79■□□□□ 0.44
EDF1O60869 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EDF1O60869 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EDF1O60869 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EDF1O60869 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EDF1O60869 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EDF1O60869 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EDF1O60869 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
EDF1O60869 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
EDF1O60869 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.78■□□□□ 0.44
EDF1O60869 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
EDF1O60869 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.78■□□□□ 0.44
EDF1O60869 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
EDF1O60869 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.78■□□□□ 0.44
EDF1O60869 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
EDF1O60869 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EDF1O60869 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.78■□□□□ 0.44
EDF1O60869 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.78■□□□□ 0.44
EDF1O60869 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EDF1O60869 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EDF1O60869 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
EDF1O60869 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EDF1O60869 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.78■□□□□ 0.44
EDF1O60869 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.78■□□□□ 0.44
EDF1O60869 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.78■□□□□ 0.44
EDF1O60869 NCF1B-203ENST00000435988 1254 ntBASIC17.78■□□□□ 0.44
EDF1O60869 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.78■□□□□ 0.44
EDF1O60869 AC008403.3-201ENST00000598924 454 ntBASIC17.78■□□□□ 0.44
EDF1O60869 HLA-J-201ENST00000462773 1622 ntBASIC17.78■□□□□ 0.44
EDF1O60869 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EDF1O60869 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.78■□□□□ 0.44
EDF1O60869 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EDF1O60869 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EDF1O60869 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
EDF1O60869 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EDF1O60869 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EDF1O60869 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.78■□□□□ 0.44
EDF1O60869 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EDF1O60869 PCDH8P1-201ENST00000428983 2773 ntBASIC17.78■□□□□ 0.44
EDF1O60869 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EDF1O60869 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
EDF1O60869 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.78■□□□□ 0.44
EDF1O60869 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EDF1O60869 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.77■□□□□ 0.44
EDF1O60869 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
EDF1O60869 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
EDF1O60869 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.77■□□□□ 0.44
EDF1O60869 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
EDF1O60869 PCDHA14-201ENST00000506751 2298 ntBASIC17.77■□□□□ 0.44
EDF1O60869 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.77■□□□□ 0.44
EDF1O60869 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
EDF1O60869 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
EDF1O60869 IKBKGP1-201ENST00000612193 1073 ntBASIC17.77■□□□□ 0.44
EDF1O60869 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EDF1O60869 AC036111.1-201ENST00000533973 1582 ntBASIC17.77■□□□□ 0.44
EDF1O60869 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EDF1O60869 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EDF1O60869 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
EDF1O60869 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EDF1O60869 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.77■□□□□ 0.43
EDF1O60869 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EDF1O60869 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EDF1O60869 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
EDF1O60869 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.77■□□□□ 0.43
EDF1O60869 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.77■□□□□ 0.43
EDF1O60869 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EDF1O60869 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.77■□□□□ 0.43
EDF1O60869 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.77■□□□□ 0.43
EDF1O60869 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.77■□□□□ 0.43
EDF1O60869 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
EDF1O60869 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
EDF1O60869 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.76■□□□□ 0.43
EDF1O60869 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.76■□□□□ 0.43
EDF1O60869 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EDF1O60869 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.76■□□□□ 0.43
EDF1O60869 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
EDF1O60869 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
EDF1O60869 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EDF1O60869 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
EDF1O60869 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.76■□□□□ 0.43
EDF1O60869 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
EDF1O60869 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
EDF1O60869 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
EDF1O60869 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms