Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.8■□□□□ 0.44
SNX3O60493 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNX3O60493 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNX3O60493 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNX3O60493 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX3O60493 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX3O60493 HLA-J-201ENST00000462773 1622 ntBASIC17.8■□□□□ 0.44
SNX3O60493 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.8■□□□□ 0.44
SNX3O60493 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX3O60493 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX3O60493 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 AC008741.2-201ENST00000612792 3115 ntBASIC17.79■□□□□ 0.44
SNX3O60493 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX3O60493 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX3O60493 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SNX3O60493 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX3O60493 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
SNX3O60493 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.79■□□□□ 0.44
SNX3O60493 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.79■□□□□ 0.44
SNX3O60493 AC008687.6-201ENST00000596318 630 ntBASIC17.79■□□□□ 0.44
SNX3O60493 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 AC009102.3-201ENST00000623118 1491 ntBASIC17.79■□□□□ 0.44
SNX3O60493 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SNX3O60493 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
SNX3O60493 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.79■□□□□ 0.44
SNX3O60493 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX3O60493 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNX3O60493 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX3O60493 NBPF21P-201ENST00000425093 1451 ntBASIC17.78■□□□□ 0.44
SNX3O60493 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
SNX3O60493 MIPEPP3-201ENST00000412105 444 ntBASIC17.78■□□□□ 0.44
SNX3O60493 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX3O60493 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX3O60493 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX3O60493 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX3O60493 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX3O60493 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.78■□□□□ 0.44
SNX3O60493 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.78■□□□□ 0.44
SNX3O60493 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX3O60493 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX3O60493 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX3O60493 AL603756.1-201ENST00000606511 2163 ntBASIC17.78■□□□□ 0.44
SNX3O60493 AC034236.2-201ENST00000606662 1610 ntBASIC17.78■□□□□ 0.44
SNX3O60493 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SNX3O60493 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX3O60493 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX3O60493 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SNX3O60493 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SNX3O60493 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX3O60493 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX3O60493 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX3O60493 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.77■□□□□ 0.44
SNX3O60493 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNX3O60493 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNX3O60493 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX3O60493 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX3O60493 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX3O60493 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.77■□□□□ 0.44
SNX3O60493 AC100803.2-201ENST00000562459 1963 ntBASIC17.77■□□□□ 0.44
SNX3O60493 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX3O60493 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNX3O60493 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX3O60493 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SNX3O60493 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNX3O60493 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX3O60493 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX3O60493 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX3O60493 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX3O60493 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX3O60493 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.44
SNX3O60493 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.77■□□□□ 0.44
SNX3O60493 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX3O60493 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms