Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
FOXN1O15353 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.54■■□□□ 1.04
FOXN1O15353 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.54■■□□□ 1.04
FOXN1O15353 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
FOXN1O15353 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
FOXN1O15353 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXN1O15353 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXN1O15353 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXN1O15353 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXN1O15353 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXN1O15353 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXN1O15353 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXN1O15353 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXN1O15353 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXN1O15353 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.53■■□□□ 1.04
FOXN1O15353 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.53■■□□□ 1.04
FOXN1O15353 YBX1P5-201ENST00000509441 847 ntBASIC21.53■■□□□ 1.04
FOXN1O15353 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXN1O15353 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.53■■□□□ 1.04
FOXN1O15353 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.53■■□□□ 1.04
FOXN1O15353 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
FOXN1O15353 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXN1O15353 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXN1O15353 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
FOXN1O15353 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXN1O15353 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXN1O15353 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
FOXN1O15353 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FOXN1O15353 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.52■■□□□ 1.04
FOXN1O15353 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXN1O15353 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXN1O15353 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXN1O15353 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FOXN1O15353 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXN1O15353 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
FOXN1O15353 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
FOXN1O15353 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.52■■□□□ 1.04
FOXN1O15353 MIR4469-201ENST00000583919 79 ntBASIC21.52■■□□□ 1.04
FOXN1O15353 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.52■■□□□ 1.04
FOXN1O15353 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXN1O15353 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXN1O15353 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
FOXN1O15353 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXN1O15353 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
FOXN1O15353 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXN1O15353 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FOXN1O15353 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.52■■□□□ 1.04
FOXN1O15353 AC063926.2-201ENST00000623766 1308 ntBASIC21.52■■□□□ 1.03
FOXN1O15353 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.52■■□□□ 1.03
FOXN1O15353 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
FOXN1O15353 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.51■■□□□ 1.03
FOXN1O15353 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 CNN2P11-201ENST00000429351 262 ntBASIC21.51■■□□□ 1.03
FOXN1O15353 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.51■■□□□ 1.03
FOXN1O15353 UNC93B6-202ENST00000528242 690 ntBASIC21.51■■□□□ 1.03
FOXN1O15353 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
FOXN1O15353 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.51■■□□□ 1.03
FOXN1O15353 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXN1O15353 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.5■■□□□ 1.03
FOXN1O15353 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXN1O15353 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXN1O15353 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXN1O15353 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXN1O15353 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXN1O15353 KRT8P3-201ENST00000519669 1449 ntBASIC21.5■■□□□ 1.03
FOXN1O15353 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
FOXN1O15353 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms