Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.15■□□□□ 0.34
UPK1AO00322 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UPK1AO00322 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UPK1AO00322 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.15■□□□□ 0.34
UPK1AO00322 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.15■□□□□ 0.34
UPK1AO00322 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.15■□□□□ 0.34
UPK1AO00322 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
UPK1AO00322 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.14■□□□□ 0.34
UPK1AO00322 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.14■□□□□ 0.34
UPK1AO00322 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1AO00322 AC022211.2-201ENST00000585075 2527 ntBASIC17.14■□□□□ 0.33
UPK1AO00322 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1AO00322 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.14■□□□□ 0.33
UPK1AO00322 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1AO00322 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.14■□□□□ 0.33
UPK1AO00322 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1AO00322 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.14■□□□□ 0.33
UPK1AO00322 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
UPK1AO00322 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.14■□□□□ 0.33
UPK1AO00322 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
UPK1AO00322 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.14■□□□□ 0.33
UPK1AO00322 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.14■□□□□ 0.33
UPK1AO00322 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1AO00322 TNRC18P3-201ENST00000441896 2691 ntBASIC17.14■□□□□ 0.33
UPK1AO00322 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.14■□□□□ 0.33
UPK1AO00322 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1AO00322 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1AO00322 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1AO00322 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1AO00322 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1AO00322 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
UPK1AO00322 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1AO00322 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1AO00322 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1AO00322 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.14■□□□□ 0.33
UPK1AO00322 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
UPK1AO00322 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.13■□□□□ 0.33
UPK1AO00322 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UPK1AO00322 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 AD000864.1-201ENST00000624076 2295 ntBASIC17.13■□□□□ 0.33
UPK1AO00322 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
UPK1AO00322 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UPK1AO00322 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UPK1AO00322 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 AP000523.1-201ENST00000398242 1049 ntBASIC17.13■□□□□ 0.33
UPK1AO00322 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UPK1AO00322 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
UPK1AO00322 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.13■□□□□ 0.33
UPK1AO00322 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.13■□□□□ 0.33
UPK1AO00322 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.13■□□□□ 0.33
UPK1AO00322 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
UPK1AO00322 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.13■□□□□ 0.33
UPK1AO00322 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1AO00322 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.13■□□□□ 0.33
UPK1AO00322 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
UPK1AO00322 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
UPK1AO00322 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UPK1AO00322 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.12■□□□□ 0.33
UPK1AO00322 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.12■□□□□ 0.33
UPK1AO00322 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.12■□□□□ 0.33
UPK1AO00322 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.12■□□□□ 0.33
UPK1AO00322 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.12■□□□□ 0.33
UPK1AO00322 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.12■□□□□ 0.33
UPK1AO00322 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
UPK1AO00322 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.12■□□□□ 0.33
UPK1AO00322 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
UPK1AO00322 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms