Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
CHKB-CPT1BH3BT56 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 AR-208ENST00000612452 10676 ntTSL 5 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC10.03□□□□□ -0.8
CHKB-CPT1BH3BT56 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
CHKB-CPT1BH3BT56 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC10.02□□□□□ -0.8
CHKB-CPT1BH3BT56 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC10.02□□□□□ -0.8
CHKB-CPT1BH3BT56 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
CHKB-CPT1BH3BT56 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
CHKB-CPT1BH3BT56 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC10.02□□□□□ -0.8
CHKB-CPT1BH3BT56 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
CHKB-CPT1BH3BT56 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
CHKB-CPT1BH3BT56 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
CHKB-CPT1BH3BT56 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
CHKB-CPT1BH3BT56 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 AC104581.4-201ENST00000623126 3052 ntBASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 FXN-202ENST00000396364 980 ntTSL 5 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 SRP68-213ENST00000629930 165 ntTSL 5 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms