Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L5A6NJ08 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L5A6NJ08 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MBD3L5A6NJ08 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
MBD3L5A6NJ08 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L5A6NJ08 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.82■□□□□ 0.12
MBD3L5A6NJ08 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L5A6NJ08 AC018445.3-201ENST00000624177 1945 ntBASIC15.82■□□□□ 0.12
MBD3L5A6NJ08 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.82■□□□□ 0.12
MBD3L5A6NJ08 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.82■□□□□ 0.12
MBD3L5A6NJ08 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.82■□□□□ 0.12
MBD3L5A6NJ08 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 AL356309.3-201ENST00000624132 1934 ntBASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 AP000867.4-201ENST00000641616 219 ntBASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L5A6NJ08 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 WIZP1-201ENST00000531444 2299 ntBASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 IL9RP2-201ENST00000423948 1312 ntBASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 RPS2P28-201ENST00000314255 741 ntBASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 SART3-203ENST00000546611 1184 ntBASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 AC021087.4-201ENST00000563761 564 ntBASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 MIR7706-201ENST00000613747 67 ntBASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 FAM215A-202ENST00000632077 792 ntBASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MBD3L5A6NJ08 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 AC010460.3-201ENST00000511359 1579 ntBASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 AL096828.2-201ENST00000567259 1965 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms