Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 AC112698.1-201ENST00000510299 916 ntBASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 AC008608.2-201ENST00000606089 416 ntBASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 AC125634.1-201ENST00000438758 1403 ntBASIC17.96■□□□□ 0.47
TBC1D3FA6NER0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TBC1D3FA6NER0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 AL022342.1-201ENST00000400363 863 ntBASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 TP73-AS1-207ENST00000624167 988 ntBASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 AC087289.5-201ENST00000586076 3175 ntBASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TBC1D3FA6NER0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 AC098818.2-201ENST00000564925 2320 ntBASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 AF186996.4-201ENST00000467186 377 ntBASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 INTS4P1-201ENST00000438455 1935 ntBASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TBC1D3FA6NER0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 AP001005.1-201ENST00000571755 1248 ntBASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 MTDHP3-201ENST00000594186 672 ntBASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 AL773604.1-201ENST00000617417 272 ntBASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms