Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 AC018445.3-201ENST00000624177 1945 ntBASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 AL356309.3-201ENST00000624132 1934 ntBASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 AP000867.4-201ENST00000641616 219 ntBASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MBD3L4A6NDZ8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 WIZP1-201ENST00000531444 2299 ntBASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 IL9RP2-201ENST00000423948 1312 ntBASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 RPS2P28-201ENST00000314255 741 ntBASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 SART3-203ENST00000546611 1184 ntBASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 AC021087.4-201ENST00000563761 564 ntBASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 MIR7706-201ENST00000613747 67 ntBASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 FAM215A-202ENST00000632077 792 ntBASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MBD3L4A6NDZ8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 AC010460.3-201ENST00000511359 1579 ntBASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
MBD3L4A6NDZ8 AL096828.2-201ENST00000567259 1965 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms