Protein–RNA interactions for Protein: A6NCI4

VWA3A, von Willebrand factor A domain-containing protein 3A, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3AA6NCI4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 RNF152P1-201ENST00000397754 604 ntBASIC20.53■□□□□ 0.88
VWA3AA6NCI4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 AK4P3-201ENST00000418260 669 ntBASIC20.53■□□□□ 0.88
VWA3AA6NCI4 TSPY5P-201ENST00000426936 936 ntBASIC20.53■□□□□ 0.88
VWA3AA6NCI4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 AL136038.4-201ENST00000603606 1261 ntBASIC20.53■□□□□ 0.88
VWA3AA6NCI4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.53■□□□□ 0.88
VWA3AA6NCI4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 RCN1P1-201ENST00000400413 996 ntBASIC20.52■□□□□ 0.88
VWA3AA6NCI4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 AC104076.2-201ENST00000448912 469 ntBASIC20.52■□□□□ 0.88
VWA3AA6NCI4 KRT18P38-201ENST00000449496 1282 ntBASIC20.52■□□□□ 0.88
VWA3AA6NCI4 AC092597.1-201ENST00000487352 616 ntBASIC20.52■□□□□ 0.88
VWA3AA6NCI4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 BCL2-203ENST00000589955 5011 ntBASIC20.52■□□□□ 0.88
VWA3AA6NCI4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VWA3AA6NCI4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
VWA3AA6NCI4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
VWA3AA6NCI4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VWA3AA6NCI4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
VWA3AA6NCI4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 AL359075.1-203ENST00000462729 1002 ntBASIC20.51■□□□□ 0.87
VWA3AA6NCI4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 RN7SL850P-201ENST00000579959 291 ntBASIC20.51■□□□□ 0.87
VWA3AA6NCI4 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VWA3AA6NCI4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
VWA3AA6NCI4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.5■□□□□ 0.87
VWA3AA6NCI4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VWA3AA6NCI4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
VWA3AA6NCI4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VWA3AA6NCI4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
VWA3AA6NCI4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VWA3AA6NCI4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
VWA3AA6NCI4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VWA3AA6NCI4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms