Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC25.86■■□□□ 1.73
CCDC144AA2RUR9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
CCDC144AA2RUR9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC144AA2RUR9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC144AA2RUR9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC144AA2RUR9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC144AA2RUR9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CCDC144AA2RUR9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 AC139887.3-201ENST00000568585 713 ntBASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC25.85■■□□□ 1.73
CCDC144AA2RUR9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC144AA2RUR9 POR-209ENST00000439269 1858 ntTSL 2 BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 PMS2P1-201ENST00000431037 1228 ntBASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 AC093909.1-201ENST00000504731 1122 ntBASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 AC022898.2-201ENST00000616822 1312 ntBASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
CCDC144AA2RUR9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC25.83■■□□□ 1.72
CCDC144AA2RUR9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC25.83■■□□□ 1.72
CCDC144AA2RUR9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CCDC144AA2RUR9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CCDC144AA2RUR9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC25.82■■□□□ 1.72
CCDC144AA2RUR9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC144AA2RUR9 RPS2P1-201ENST00000434010 821 ntBASIC25.82■■□□□ 1.72
CCDC144AA2RUR9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC25.82■■□□□ 1.72
CCDC144AA2RUR9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC144AA2RUR9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
CCDC144AA2RUR9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC25.82■■□□□ 1.72
CCDC144AA2RUR9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC144AA2RUR9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC25.82■■□□□ 1.72
CCDC144AA2RUR9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC144AA2RUR9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC144AA2RUR9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
CCDC144AA2RUR9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC25.82■■□□□ 1.72
CCDC144AA2RUR9 PMPCAP1-201ENST00000508114 1576 ntBASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 AD001527.2-201ENST00000622994 785 ntBASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 AC073592.4-201ENST00000623827 446 ntBASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 AF228730.7-201ENST00000641842 219 ntBASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms