Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 DNAJB3-201ENST00000446806 729 ntBASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 AC040169.1-201ENST00000565382 521 ntBASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC187A0A096LP49 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 LAGE3P1-201ENST00000425356 484 ntBASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 RNA5SP416-201ENST00000516838 111 ntBASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 MIR3687-2-201ENST00000577708 61 ntBASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 AC010327.4-202ENST00000591484 748 ntBASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 MIR3687-1-201ENST00000614492 61 ntBASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
CCDC187A0A096LP49 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 AC055717.3-201ENST00000622967 595 ntBASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 AP000867.4-201ENST00000641616 219 ntBASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC187A0A096LP49 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC187A0A096LP49 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms