Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 AC008550.1-201ENST00000511500 884 ntBASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 AC104390.1-201ENST00000555663 520 ntBASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 AC092338.2-201ENST00000568827 1415 ntBASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV30A0A087WSZ9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms