Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 GRAMD4P7-201ENST00000578182 1232 ntBASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 AL451085.2-201ENST00000605085 799 ntBASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01558Q9Y6Z2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.92
LINC01558Q9Y6Z2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.92
LINC01558Q9Y6Z2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
LINC01558Q9Y6Z2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC01558Q9Y6Z2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms