Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGA4Q9Y5G9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
PCDHGA4Q9Y5G9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
PCDHGA4Q9Y5G9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGA4Q9Y5G9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGA4Q9Y5G9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 AL357033.4-201ENST00000617703 1807 ntBASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 AC092119.3-201ENST00000612618 583 ntBASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 NPAP1P7-201ENST00000613027 823 ntBASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 AL031598.1-201ENST00000561511 1773 ntBASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA4Q9Y5G9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 AC137695.1-201ENST00000604126 489 ntBASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 AP000240.1-201ENST00000609910 452 ntBASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA4Q9Y5G9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 MIR564-202ENST00000385049 94 ntBASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 AC246785.2-201ENST00000432512 513 ntBASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 SPDYE13P-201ENST00000445314 798 ntBASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 PRELID1P1-202ENST00000567272 903 ntBASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA4Q9Y5G9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA4Q9Y5G9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA4Q9Y5G9 Z98044.1-201ENST00000632503 1764 ntBASIC17.86■□□□□ 0.45
PCDHGA4Q9Y5G9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA4Q9Y5G9 AC090340.1-201ENST00000620778 4980 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms