Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CDK11AQ9UQ88 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC27.83■■■□□ 2.05
CDK11AQ9UQ88 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC27.83■■■□□ 2.05
CDK11AQ9UQ88 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CDK11AQ9UQ88 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
CDK11AQ9UQ88 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
CDK11AQ9UQ88 PRYP5-201ENST00000451909 266 ntBASIC27.83■■■□□ 2.05
CDK11AQ9UQ88 AC010327.4-202ENST00000591484 748 ntBASIC27.83■■■□□ 2.05
CDK11AQ9UQ88 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC27.83■■■□□ 2.05
CDK11AQ9UQ88 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC27.83■■■□□ 2.05
CDK11AQ9UQ88 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC27.83■■■□□ 2.04
CDK11AQ9UQ88 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 ANO7L1-203ENST00000602586 1720 ntBASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 KRT18P27-201ENST00000427733 1299 ntBASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 AC009947.1-201ENST00000444350 727 ntBASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 HOTTIP_1.1-201ENST00000620415 57 ntBASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 AD001527.2-201ENST00000622994 785 ntBASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CDK11AQ9UQ88 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 AC004832.2-201ENST00000426397 482 ntBASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 MIR3687-2-201ENST00000577708 61 ntBASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 CYGB-205ENST00000590175 830 ntTSL 3 BASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 MIR3687-1-201ENST00000614492 61 ntBASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 PGM5P2-202ENST00000637225 1043 ntBASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 SIGLEC16-201ENST00000599858 1437 ntBASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 AIRN-201ENST00000601203 4374 ntBASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC27.81■■■□□ 2.04
CDK11AQ9UQ88 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 PMP22-202ENST00000395936 816 ntTSL 3 BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 CRCP-205ENST00000431089 942 ntTSL 2 BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 FIS1-203ENST00000442303 631 ntTSL 3 BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 BX005266.1-201ENST00000473402 457 ntBASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 ETFA-208ENST00000559602 792 ntTSL 3 BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 AC006557.2-201ENST00000592985 1240 ntBASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CDK11AQ9UQ88 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 AC005082.1-201ENST00000413042 2259 ntBASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 AL139424.1-201ENST00000607572 797 ntBASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 MIR1199-201ENST00000621445 119 ntBASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDK11AQ9UQ88 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms