Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 AC091607.1-201ENST00000490318 1060 ntBASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 MTMR9LP-203ENST00000426597 1545 ntBASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 AP005901.3-202ENST00000581653 237 ntBASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 KRT89P-201ENST00000620027 1478 ntBASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HDAC6Q9UBN7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 KRT16P4-201ENST00000453883 522 ntBASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 AL353801.3-201ENST00000609898 542 ntBASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 NOC2LP1-202ENST00000452600 2235 ntBASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.42■□□□□ 0.86
HDAC6Q9UBN7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms