Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PARPBPQ9NWS1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.2■□□□□ 0.18
PARPBPQ9NWS1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PARPBPQ9NWS1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PARPBPQ9NWS1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.2■□□□□ 0.18
PARPBPQ9NWS1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PARPBPQ9NWS1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
PARPBPQ9NWS1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PARPBPQ9NWS1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PARPBPQ9NWS1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 VENTXP5-201ENST00000523979 775 ntBASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PARPBPQ9NWS1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 AP003733.1-201ENST00000491725 852 ntBASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 AC113404.2-201ENST00000507884 177 ntBASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 AC083849.1-201ENST00000615227 514 ntBASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.18■□□□□ 0.18
PARPBPQ9NWS1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms