Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.87■□□□□ 0.29
CTPS2Q9NRF8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTPS2Q9NRF8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 KRT18P22-201ENST00000402024 1347 ntBASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 SDHAP2-201ENST00000455183 2001 ntBASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTPS2Q9NRF8 AC012313.1-201ENST00000593393 3059 ntBASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 HMGA1P5-201ENST00000412453 271 ntBASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 KRT18P23-201ENST00000435622 1283 ntBASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 WWOX-216ENST00000569818 525 ntBASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 AC145285.6-201ENST00000604632 637 ntBASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 AC133561.5-201ENST00000635547 218 ntBASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.85■□□□□ 0.29
CTPS2Q9NRF8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 AL163051.1-201ENST00000569214 1512 ntBASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms