Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TLR9Q9NR96 RPSAP43-201ENST00000402237 625 ntBASIC19.13■□□□□ 0.65
TLR9Q9NR96 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.13■□□□□ 0.65
TLR9Q9NR96 GPX1P2-201ENST00000429271 606 ntBASIC19.13■□□□□ 0.65
TLR9Q9NR96 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.13■□□□□ 0.65
TLR9Q9NR96 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.13■□□□□ 0.65
TLR9Q9NR96 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.13■□□□□ 0.65
TLR9Q9NR96 AC105339.3-201ENST00000560043 636 ntBASIC19.13■□□□□ 0.65
TLR9Q9NR96 AC040169.1-201ENST00000565382 521 ntBASIC19.13■□□□□ 0.65
TLR9Q9NR96 AC027796.2-201ENST00000575326 344 ntBASIC19.13■□□□□ 0.65
TLR9Q9NR96 NKAPP1-205ENST00000585790 367 ntBASIC19.13■□□□□ 0.65
TLR9Q9NR96 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.13■□□□□ 0.65
TLR9Q9NR96 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.13■□□□□ 0.65
TLR9Q9NR96 AC107918.4-202ENST00000641623 219 ntBASIC19.13■□□□□ 0.65
TLR9Q9NR96 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TLR9Q9NR96 LINC01126-201ENST00000623515 1646 ntBASIC19.13■□□□□ 0.65
TLR9Q9NR96 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.13■□□□□ 0.65
TLR9Q9NR96 BX323043.1-201ENST00000641006 1765 ntBASIC19.13■□□□□ 0.65
TLR9Q9NR96 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 AL049812.1-201ENST00000432563 2267 ntBASIC19.13■□□□□ 0.65
TLR9Q9NR96 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TLR9Q9NR96 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.12■□□□□ 0.65
TLR9Q9NR96 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.12■□□□□ 0.65
TLR9Q9NR96 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.12■□□□□ 0.65
TLR9Q9NR96 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 AC112698.1-201ENST00000510299 916 ntBASIC19.12■□□□□ 0.65
TLR9Q9NR96 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.12■□□□□ 0.65
TLR9Q9NR96 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.12■□□□□ 0.65
TLR9Q9NR96 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
TLR9Q9NR96 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.12■□□□□ 0.65
TLR9Q9NR96 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TLR9Q9NR96 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TLR9Q9NR96 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TLR9Q9NR96 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TLR9Q9NR96 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.11■□□□□ 0.65
TLR9Q9NR96 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.11■□□□□ 0.65
TLR9Q9NR96 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TLR9Q9NR96 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TLR9Q9NR96 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TLR9Q9NR96 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TLR9Q9NR96 YBX2P1-201ENST00000394192 760 ntBASIC19.11■□□□□ 0.65
TLR9Q9NR96 PMS2P2-201ENST00000425039 1128 ntBASIC19.11■□□□□ 0.65
TLR9Q9NR96 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TLR9Q9NR96 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.11■□□□□ 0.65
TLR9Q9NR96 DNAJB3-201ENST00000446806 729 ntBASIC19.11■□□□□ 0.65
TLR9Q9NR96 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.11■□□□□ 0.65
TLR9Q9NR96 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.11■□□□□ 0.65
TLR9Q9NR96 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.11■□□□□ 0.65
TLR9Q9NR96 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.11■□□□□ 0.65
TLR9Q9NR96 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.11■□□□□ 0.65
TLR9Q9NR96 MIR3687-2-201ENST00000577708 61 ntBASIC19.11■□□□□ 0.65
TLR9Q9NR96 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TLR9Q9NR96 MIR3687-1-201ENST00000614492 61 ntBASIC19.11■□□□□ 0.65
TLR9Q9NR96 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.11■□□□□ 0.65
TLR9Q9NR96 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.11■□□□□ 0.65
TLR9Q9NR96 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TLR9Q9NR96 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TLR9Q9NR96 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.11■□□□□ 0.65
TLR9Q9NR96 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TLR9Q9NR96 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.1■□□□□ 0.65
TLR9Q9NR96 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TLR9Q9NR96 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
TLR9Q9NR96 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.1■□□□□ 0.65
TLR9Q9NR96 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TLR9Q9NR96 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TLR9Q9NR96 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.1■□□□□ 0.65
TLR9Q9NR96 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
TLR9Q9NR96 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.1■□□□□ 0.65
TLR9Q9NR96 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TLR9Q9NR96 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.1■□□□□ 0.65
TLR9Q9NR96 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.1■□□□□ 0.65
TLR9Q9NR96 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.1■□□□□ 0.65
TLR9Q9NR96 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.1■□□□□ 0.65
TLR9Q9NR96 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.1■□□□□ 0.65
TLR9Q9NR96 RNA5SP416-201ENST00000516838 111 ntBASIC19.1■□□□□ 0.65
TLR9Q9NR96 UNC93B6-202ENST00000528242 690 ntBASIC19.1■□□□□ 0.65
TLR9Q9NR96 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
TLR9Q9NR96 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms