Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 AC068472.1-201ENST00000474589 881 ntBASIC18.7■□□□□ 0.58
HPS4Q9NQG7 MYLKP1-201ENST00000509077 1580 ntBASIC18.7■□□□□ 0.58
HPS4Q9NQG7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 AL671883.3-201ENST00000603274 991 ntBASIC18.7■□□□□ 0.58
HPS4Q9NQG7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 BX640515.1-201ENST00000617215 977 ntBASIC18.7■□□□□ 0.58
HPS4Q9NQG7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 AL590627.1-203ENST00000421194 1026 ntBASIC18.69■□□□□ 0.58
HPS4Q9NQG7 FAM197Y8-203ENST00000450145 560 ntBASIC18.69■□□□□ 0.58
HPS4Q9NQG7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 AC008687.5-201ENST00000593746 558 ntBASIC18.69■□□□□ 0.58
HPS4Q9NQG7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.69■□□□□ 0.58
HPS4Q9NQG7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 RCN1P2-201ENST00000398357 915 ntBASIC18.68■□□□□ 0.58
HPS4Q9NQG7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 AC132008.2-207ENST00000454517 770 ntBASIC18.68■□□□□ 0.58
HPS4Q9NQG7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS4Q9NQG7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS4Q9NQG7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HPS4Q9NQG7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HPS4Q9NQG7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS4Q9NQG7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.67■□□□□ 0.58
HPS4Q9NQG7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.67■□□□□ 0.58
HPS4Q9NQG7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS4Q9NQG7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS4Q9NQG7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS4Q9NQG7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms