Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 CA15P1-201ENST00000481698 905 ntBASIC16.37■□□□□ 0.21
HINT3Q9NQE9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 LINC01023-201ENST00000606054 436 ntBASIC16.37■□□□□ 0.21
HINT3Q9NQE9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 AC009053.2-201ENST00000563701 2365 ntBASIC16.37■□□□□ 0.21
HINT3Q9NQE9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 AC141586.5-201ENST00000624546 2050 ntBASIC16.36■□□□□ 0.21
HINT3Q9NQE9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 NAPSB-206ENST00000562112 1266 ntBASIC16.36■□□□□ 0.21
HINT3Q9NQE9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 LINC01126-201ENST00000623515 1646 ntBASIC16.36■□□□□ 0.21
HINT3Q9NQE9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 HOXB1-202ENST00000577092 1414 ntBASIC16.36■□□□□ 0.21
HINT3Q9NQE9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.36■□□□□ 0.21
HINT3Q9NQE9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 C2orf69P3-201ENST00000565542 1120 ntBASIC16.35■□□□□ 0.21
HINT3Q9NQE9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.35■□□□□ 0.21
HINT3Q9NQE9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HINT3Q9NQE9 PCDHA12-202ENST00000613593 2588 ntBASIC16.34■□□□□ 0.21
HINT3Q9NQE9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 ECEL1P3-201ENST00000427961 737 ntBASIC16.34■□□□□ 0.21
HINT3Q9NQE9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms