Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.39■□□□□ 0.54
LRRC40Q9H9A6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC40Q9H9A6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 COX11P1-201ENST00000489116 835 ntBASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 AC005363.2-201ENST00000618631 242 ntBASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC40Q9H9A6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 AL137013.1-201ENST00000432946 1228 ntBASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 KRT18P55-202ENST00000578578 1546 ntBASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC40Q9H9A6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 DUTP2-201ENST00000519164 463 ntBASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC40Q9H9A6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 TERF1P1-201ENST00000311003 1181 ntBASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 RASA4DP-201ENST00000460726 1199 ntBASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 AC132938.6-201ENST00000623828 1655 ntBASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms