Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD3Q9BV44 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD3Q9BV44 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD3Q9BV44 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD3Q9BV44 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.33■□□□□ 0.36
THUMPD3Q9BV44 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.33■□□□□ 0.36
THUMPD3Q9BV44 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 TSPY7P-201ENST00000431358 1114 ntBASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 AP000692.2-201ENST00000608391 879 ntBASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 REXO1L10P-201ENST00000615707 1290 ntBASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 REXO1L12P-201ENST00000622156 912 ntBASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 AC106820.2-201ENST00000563775 3264 ntBASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.32■□□□□ 0.36
THUMPD3Q9BV44 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
THUMPD3Q9BV44 PRORSD1P-202ENST00000563365 2154 ntBASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 AP003071.4-201ENST00000562276 1284 ntBASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 SLC25A1P4-201ENST00000567977 778 ntBASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
THUMPD3Q9BV44 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms