Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.04□□□□□ -0.48
LITAFQ99732 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
LITAFQ99732 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LITAFQ99732 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.04□□□□□ -0.48
LITAFQ99732 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.04□□□□□ -0.48
LITAFQ99732 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.04□□□□□ -0.48
LITAFQ99732 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LITAFQ99732 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LITAFQ99732 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LITAFQ99732 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LITAFQ99732 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.04□□□□□ -0.48
LITAFQ99732 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.04□□□□□ -0.48
LITAFQ99732 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LITAFQ99732 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LITAFQ99732 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.03□□□□□ -0.48
LITAFQ99732 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.03□□□□□ -0.48
LITAFQ99732 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.03□□□□□ -0.48
LITAFQ99732 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
LITAFQ99732 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
LITAFQ99732 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.03□□□□□ -0.48
LITAFQ99732 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
LITAFQ99732 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.03□□□□□ -0.48
LITAFQ99732 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.03□□□□□ -0.48
LITAFQ99732 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LITAFQ99732 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LITAFQ99732 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.03□□□□□ -0.48
LITAFQ99732 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
LITAFQ99732 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC12.03□□□□□ -0.48
LITAFQ99732 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LITAFQ99732 AL139246.5-201ENST00000606645 996 ntBASIC12.03□□□□□ -0.48
LITAFQ99732 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC12.03□□□□□ -0.48
LITAFQ99732 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
LITAFQ99732 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.03□□□□□ -0.48
LITAFQ99732 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LITAFQ99732 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LITAFQ99732 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.03□□□□□ -0.48
LITAFQ99732 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.03□□□□□ -0.48
LITAFQ99732 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LITAFQ99732 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
LITAFQ99732 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
LITAFQ99732 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.03□□□□□ -0.48
LITAFQ99732 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.03□□□□□ -0.48
LITAFQ99732 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.03□□□□□ -0.48
LITAFQ99732 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LITAFQ99732 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LITAFQ99732 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
LITAFQ99732 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.02□□□□□ -0.48
LITAFQ99732 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.02□□□□□ -0.48
LITAFQ99732 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.02□□□□□ -0.48
LITAFQ99732 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LITAFQ99732 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
LITAFQ99732 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LITAFQ99732 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LITAFQ99732 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.02□□□□□ -0.48
LITAFQ99732 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LITAFQ99732 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.02□□□□□ -0.49
LITAFQ99732 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.02□□□□□ -0.49
LITAFQ99732 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 AC007950.2-201ENST00000615045 2347 ntBASIC12.02□□□□□ -0.49
LITAFQ99732 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.02□□□□□ -0.49
LITAFQ99732 AC100803.2-201ENST00000562459 1963 ntBASIC12.02□□□□□ -0.49
LITAFQ99732 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
LITAFQ99732 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC12.02□□□□□ -0.49
LITAFQ99732 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.02□□□□□ -0.49
LITAFQ99732 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
LITAFQ99732 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.02□□□□□ -0.49
LITAFQ99732 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms