Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CASD1Q96PB1 Z83851.2-201ENST00000609564 659 ntBASIC19.22■□□□□ 0.67
CASD1Q96PB1 FAM197Y3-203ENST00000618346 717 ntBASIC19.22■□□□□ 0.67
CASD1Q96PB1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASD1Q96PB1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASD1Q96PB1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASD1Q96PB1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.22■□□□□ 0.67
CASD1Q96PB1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CASD1Q96PB1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASD1Q96PB1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASD1Q96PB1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASD1Q96PB1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASD1Q96PB1 AP002414.3-201ENST00000589352 1468 ntBASIC19.22■□□□□ 0.67
CASD1Q96PB1 AC093010.1-201ENST00000473625 1624 ntBASIC19.22■□□□□ 0.67
CASD1Q96PB1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CASD1Q96PB1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CASD1Q96PB1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASD1Q96PB1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASD1Q96PB1 KRT8P47-201ENST00000604727 1398 ntBASIC19.21■□□□□ 0.67
CASD1Q96PB1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASD1Q96PB1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASD1Q96PB1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASD1Q96PB1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASD1Q96PB1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.21■□□□□ 0.67
CASD1Q96PB1 MIR1233-2-201ENST00000408138 82 ntBASIC19.21■□□□□ 0.67
CASD1Q96PB1 MIR1233-1-201ENST00000408722 82 ntBASIC19.21■□□□□ 0.67
CASD1Q96PB1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.21■□□□□ 0.67
CASD1Q96PB1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.21■□□□□ 0.67
CASD1Q96PB1 BX005266.1-201ENST00000473402 457 ntBASIC19.21■□□□□ 0.67
CASD1Q96PB1 AC122714.2-201ENST00000502787 707 ntBASIC19.21■□□□□ 0.67
CASD1Q96PB1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.21■□□□□ 0.67
CASD1Q96PB1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.21■□□□□ 0.67
CASD1Q96PB1 AL356488.2-201ENST00000602755 427 ntBASIC19.21■□□□□ 0.67
CASD1Q96PB1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASD1Q96PB1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.21■□□□□ 0.67
CASD1Q96PB1 AD001527.2-201ENST00000622994 785 ntBASIC19.21■□□□□ 0.67
CASD1Q96PB1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASD1Q96PB1 PHGDH-209ENST00000641074 1780 ntBASIC19.21■□□□□ 0.67
CASD1Q96PB1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASD1Q96PB1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CASD1Q96PB1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CASD1Q96PB1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CASD1Q96PB1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CASD1Q96PB1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASD1Q96PB1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASD1Q96PB1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.2■□□□□ 0.66
CASD1Q96PB1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASD1Q96PB1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CASD1Q96PB1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CASD1Q96PB1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.2■□□□□ 0.66
CASD1Q96PB1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASD1Q96PB1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASD1Q96PB1 MED15P5-201ENST00000423150 992 ntBASIC19.2■□□□□ 0.66
CASD1Q96PB1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CASD1Q96PB1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CASD1Q96PB1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.2■□□□□ 0.66
CASD1Q96PB1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASD1Q96PB1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASD1Q96PB1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.2■□□□□ 0.66
CASD1Q96PB1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASD1Q96PB1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CASD1Q96PB1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASD1Q96PB1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CASD1Q96PB1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CASD1Q96PB1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASD1Q96PB1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CASD1Q96PB1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CASD1Q96PB1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.19■□□□□ 0.66
CASD1Q96PB1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASD1Q96PB1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CASD1Q96PB1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASD1Q96PB1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CASD1Q96PB1 LAGE3P1-201ENST00000425356 484 ntBASIC19.19■□□□□ 0.66
CASD1Q96PB1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.19■□□□□ 0.66
CASD1Q96PB1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.19■□□□□ 0.66
CASD1Q96PB1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.19■□□□□ 0.66
CASD1Q96PB1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.19■□□□□ 0.66
CASD1Q96PB1 UNC93B6-202ENST00000528242 690 ntBASIC19.19■□□□□ 0.66
CASD1Q96PB1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CASD1Q96PB1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CASD1Q96PB1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.19■□□□□ 0.66
CASD1Q96PB1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CASD1Q96PB1 AC073592.4-201ENST00000623827 446 ntBASIC19.19■□□□□ 0.66
CASD1Q96PB1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASD1Q96PB1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASD1Q96PB1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CASD1Q96PB1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASD1Q96PB1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASD1Q96PB1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CASD1Q96PB1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CASD1Q96PB1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASD1Q96PB1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASD1Q96PB1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASD1Q96PB1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASD1Q96PB1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms