Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 AP005117.1-201ENST00000584346 1413 ntBASIC21.04■□□□□ 0.96
CCDC17Q96LX7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 AC098818.2-201ENST00000564925 2320 ntBASIC21.03■□□□□ 0.96
CCDC17Q96LX7 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.03■□□□□ 0.96
CCDC17Q96LX7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 AL138781.2-201ENST00000617896 1843 ntBASIC21.03■□□□□ 0.96
CCDC17Q96LX7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC17Q96LX7 HLA-A-201ENST00000376802 1334 ntBASIC21.03■□□□□ 0.96
CCDC17Q96LX7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 TNXA-203ENST00000507684 2038 ntBASIC21.02■□□□□ 0.96
CCDC17Q96LX7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.02■□□□□ 0.96
CCDC17Q96LX7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 KRT18P67-201ENST00000432816 1264 ntBASIC21.02■□□□□ 0.96
CCDC17Q96LX7 FGFR3P6-201ENST00000457012 610 ntBASIC21.02■□□□□ 0.96
CCDC17Q96LX7 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 MTDHP3-201ENST00000594186 672 ntBASIC21.02■□□□□ 0.96
CCDC17Q96LX7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 AC093677.2-201ENST00000600169 1863 ntBASIC21.02■□□□□ 0.96
CCDC17Q96LX7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC17Q96LX7 AC093503.3-201ENST00000624917 2352 ntBASIC21.02■□□□□ 0.96
CCDC17Q96LX7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC17Q96LX7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC17Q96LX7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 AC007967.3-201ENST00000434308 558 ntBASIC21.01■□□□□ 0.95
CCDC17Q96LX7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC17Q96LX7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
CCDC17Q96LX7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC17Q96LX7 AL096828.2-201ENST00000567259 1965 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms