Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CALR3Q96L12 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CALR3Q96L12 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CALR3Q96L12 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.14■□□□□ 0.65
CALR3Q96L12 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.14■□□□□ 0.65
CALR3Q96L12 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.14■□□□□ 0.65
CALR3Q96L12 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALR3Q96L12 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CALR3Q96L12 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CALR3Q96L12 AL512604.3-201ENST00000569583 964 ntBASIC19.14■□□□□ 0.65
CALR3Q96L12 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CALR3Q96L12 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.14■□□□□ 0.65
CALR3Q96L12 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALR3Q96L12 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALR3Q96L12 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALR3Q96L12 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.14■□□□□ 0.65
CALR3Q96L12 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CALR3Q96L12 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALR3Q96L12 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CALR3Q96L12 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.14■□□□□ 0.65
CALR3Q96L12 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.14■□□□□ 0.65
CALR3Q96L12 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALR3Q96L12 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALR3Q96L12 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.13■□□□□ 0.65
CALR3Q96L12 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.13■□□□□ 0.65
CALR3Q96L12 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.13■□□□□ 0.65
CALR3Q96L12 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.13■□□□□ 0.65
CALR3Q96L12 AC007663.1-201ENST00000438948 1240 ntBASIC19.13■□□□□ 0.65
CALR3Q96L12 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.13■□□□□ 0.65
CALR3Q96L12 RBM17P1-201ENST00000453646 1190 ntBASIC19.13■□□□□ 0.65
CALR3Q96L12 AC098590.1-201ENST00000468126 897 ntBASIC19.13■□□□□ 0.65
CALR3Q96L12 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.13■□□□□ 0.65
CALR3Q96L12 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CALR3Q96L12 C2orf69P3-201ENST00000565542 1120 ntBASIC19.13■□□□□ 0.65
CALR3Q96L12 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CALR3Q96L12 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.13■□□□□ 0.65
CALR3Q96L12 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CALR3Q96L12 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.13■□□□□ 0.65
CALR3Q96L12 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.13■□□□□ 0.65
CALR3Q96L12 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.13■□□□□ 0.65
CALR3Q96L12 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.13■□□□□ 0.65
CALR3Q96L12 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CALR3Q96L12 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALR3Q96L12 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CALR3Q96L12 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.12■□□□□ 0.65
CALR3Q96L12 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CALR3Q96L12 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CALR3Q96L12 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CALR3Q96L12 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.12■□□□□ 0.65
CALR3Q96L12 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.12■□□□□ 0.65
CALR3Q96L12 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 TSPY20P-201ENST00000450910 630 ntBASIC19.12■□□□□ 0.65
CALR3Q96L12 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.12■□□□□ 0.65
CALR3Q96L12 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.12■□□□□ 0.65
CALR3Q96L12 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.12■□□□□ 0.65
CALR3Q96L12 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.12■□□□□ 0.65
CALR3Q96L12 MIR4785-201ENST00000585005 73 ntBASIC19.12■□□□□ 0.65
CALR3Q96L12 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.12■□□□□ 0.65
CALR3Q96L12 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.12■□□□□ 0.65
CALR3Q96L12 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.12■□□□□ 0.65
CALR3Q96L12 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.12■□□□□ 0.65
CALR3Q96L12 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.12■□□□□ 0.65
CALR3Q96L12 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CALR3Q96L12 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CALR3Q96L12 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.11■□□□□ 0.65
CALR3Q96L12 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms