Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 PCED1CP-201ENST00000419887 785 ntBASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 RN7SL606P-201ENST00000472779 293 ntBASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 KRT8P26-201ENST00000534154 1276 ntBASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CTHRC1Q96CG8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 MTCL1P1-201ENST00000446207 792 ntBASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 AC112698.1-201ENST00000510299 916 ntBASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 AL133373.2-201ENST00000623187 2828 ntBASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 AC018470.1-201ENST00000624790 3129 ntBASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CTHRC1Q96CG8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 AC006116.8-202ENST00000587620 1550 ntBASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms