Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 AC092647.4-201ENST00000457211 535 ntBASIC17.41■□□□□ 0.38
UBE2E3Q969T4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
UBE2E3Q969T4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 SPDYE15P-201ENST00000424157 909 ntBASIC17.4■□□□□ 0.38
UBE2E3Q969T4 KRT18P48-201ENST00000434763 852 ntBASIC17.4■□□□□ 0.38
UBE2E3Q969T4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2E3Q969T4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
UBE2E3Q969T4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
UBE2E3Q969T4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
UBE2E3Q969T4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
UBE2E3Q969T4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 HLA-F-220ENST00000434407 884 ntBASIC17.39■□□□□ 0.37
UBE2E3Q969T4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 LINC01238-205ENST00000567549 1107 ntBASIC17.39■□□□□ 0.37
UBE2E3Q969T4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 AC008764.6-201ENST00000595909 2069 ntBASIC17.39■□□□□ 0.37
UBE2E3Q969T4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms