Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 NOC2LP1-202ENST00000452600 2235 ntBASIC18.24■□□□□ 0.51
CHD5Q8TDI0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 AC007967.3-201ENST00000434308 558 ntBASIC18.24■□□□□ 0.51
CHD5Q8TDI0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 AC099336.1-202ENST00000602961 463 ntBASIC18.24■□□□□ 0.51
CHD5Q8TDI0 AC092119.3-201ENST00000612618 583 ntBASIC18.24■□□□□ 0.51
CHD5Q8TDI0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD5Q8TDI0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 AC009949.1-201ENST00000623048 1830 ntBASIC18.23■□□□□ 0.51
CHD5Q8TDI0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.23■□□□□ 0.51
CHD5Q8TDI0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 AC125634.1-201ENST00000438758 1403 ntBASIC18.22■□□□□ 0.51
CHD5Q8TDI0 AC006116.8-202ENST00000587620 1550 ntBASIC18.22■□□□□ 0.51
CHD5Q8TDI0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 AC008764.6-201ENST00000595909 2069 ntBASIC18.22■□□□□ 0.51
CHD5Q8TDI0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 AP000867.3-201ENST00000524675 377 ntBASIC18.22■□□□□ 0.51
CHD5Q8TDI0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD5Q8TDI0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 AC111152.3-201ENST00000569699 673 ntBASIC18.21■□□□□ 0.51
CHD5Q8TDI0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 AC138894.3-201ENST00000603787 634 ntBASIC18.21■□□□□ 0.51
CHD5Q8TDI0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms