Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 AC126763.1-201ENST00000552015 2118 ntBASIC20.48■□□□□ 0.87
RETREG2Q8NC44 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 AL662844.1-201ENST00000546340 181 ntBASIC20.48■□□□□ 0.87
RETREG2Q8NC44 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 Z69720.1-201ENST00000601483 472 ntBASIC20.48■□□□□ 0.87
RETREG2Q8NC44 AL390719.2-201ENST00000606993 987 ntBASIC20.48■□□□□ 0.87
RETREG2Q8NC44 GPALPP1-207ENST00000611650 899 ntBASIC20.48■□□□□ 0.87
RETREG2Q8NC44 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETREG2Q8NC44 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 AC099336.1-202ENST00000602961 463 ntBASIC20.47■□□□□ 0.87
RETREG2Q8NC44 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RETREG2Q8NC44 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 LINC00167-201ENST00000530583 1419 ntBASIC20.46■□□□□ 0.87
RETREG2Q8NC44 KRT8P50-201ENST00000562022 1438 ntBASIC20.46■□□□□ 0.87
RETREG2Q8NC44 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 AC020763.4-201ENST00000623414 4170 ntBASIC20.46■□□□□ 0.87
RETREG2Q8NC44 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 AP002469.2-201ENST00000531724 424 ntBASIC20.46■□□□□ 0.87
RETREG2Q8NC44 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.46■□□□□ 0.87
RETREG2Q8NC44 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms